diff --git a/3_TSO500.sh b/3_TSO500.sh index 0df93aa..82e5d1a 100755 --- a/3_TSO500.sh +++ b/3_TSO500.sh @@ -91,6 +91,9 @@ for worksheet_id in $(cat worksheets_rna.txt); do else cat analysis/"$sample"/"$sample"_RNA_QC.txt | tail -n1 >> RNA_QC_combined.txt fi + + # make database upload sample list header + echo "sample,worksheet,assay,referral,run,genome_build,coverage,ntc_coverage" > Gathered_Results/Database/samples_database_"$worksheet_id"_RNA.csv # make database upload sample list if [[ "$sample" != NTC* ]]; then