Add preliminary test for '_analyse' for tomo workflow

Author: tieneupin

tests/client/test_analyser.py

@@ -308,7 +308,7 @@ def test_analyse_atlas(
         if context == "AtlasContext"
     ]
 
-    # Mock the 'post_transfer' class function
+    # Set up mocks and spies
     mock_post_transfer = mocker.patch.object(Analyser, "post_transfer")
     spy_find_context = mocker.spy(Analyser, "_find_context")
 
@@ -343,7 +343,7 @@ def test_analyse_spa(
         if context == context_to_test
     ]
 
-    # Mock the 'post_transfer' class function
+    # Set up mocks and spies
     mock_post_transfer = mocker.patch.object(Analyser, "post_transfer")
     spy_find_context = mocker.spy(Analyser, "_find_context")
     spy_find_extension = mocker.spy(Analyser, "_find_extension")
@@ -361,5 +361,42 @@ def test_analyse_spa(
         mock_post_transfer.assert_called()
 
 
-def test_analyse_tomo():
-    pass
+@pytest.mark.parametrize(
+    "context_to_test",
+    ("TomographyContext", "TomographyMetadataContext"),
+)
+def test_analyse_tomo(
+    mocker: MockerFixture,
+    context_to_test: str,
+    tmp_path: Path,
+):
+    test_files = [
+        file
+        for context, file_list in example_files.items()
+        for file in file_list
+        if context == context_to_test
+    ]
+
+    # Set up mocks and spies
+    mock_post_transfer = mocker.patch.object(Analyser, "post_transfer")
+    if context_to_test == "TomographyContext":
+        mock_gather_metadata = mocker.patch(
+            "murfey.client.contexts.tomo.TomographyContext.gather_metadata"
+        )
+    else:
+        mock_gather_metadata = mocker.patch(
+            "murfey.client.contexts.tomo_metadata.TomographyMetadataContext.gather_metadata"
+        )
+    mock_gather_metadata.return_value = {"dummy": "dummy"}
+
+    spy_find_context = mocker.spy(Analyser, "_find_context")
+    spy_find_extension = mocker.spy(Analyser, "_find_extension")
+
+    # Initialise the Analyser
+    analyser = Analyser(tmp_path, "", force_mdoc_metadata=True)
+    for file in test_files:
+        analyser._analyse(tmp_path / file)
+
+    assert spy_find_context.call_count == 1
+    assert spy_find_extension.call_count > 0
+    mock_post_transfer.assert_called()