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Init step contingencies
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02-run.md

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@@ -129,6 +129,18 @@ qstat -u $USER -f -w
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:::
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:::{dropdown} Contingency
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Try switching from the `main` to the `develop`
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[queue](https://ncar-hpc-docs.readthedocs.io/en/latest/pbs/charging/#derecho-queues).
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If that doesn't help, copy the static file from Kelly.
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```bash
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cp /glade/derecho/scratch/knocasio/mpas-global240km/x1.10242.static.nc .
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```
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:::
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(global-ic)=
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## Initial conditions
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See Section 3.2 in the [official virtual tutorial](https://www2.mmm.ucar.edu/projects/mpas/tutorial/Virtual2025/).
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```
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:::{dropdown} Contingency
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Try switching from the `main` to the `develop`
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[queue](https://ncar-hpc-docs.readthedocs.io/en/latest/pbs/charging/#derecho-queues).
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If that doesn't help, copy the init file from Kelly.
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```bash
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cp /glade/derecho/scratch/knocasio/mpas-global240km/x1.10242.init.nc .
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```
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:::
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## Run the model
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Update `namelist.atmosphere` with these settings:
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qsub init.pbs
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```
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:::{dropdown} Contingency
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Try switching from the `main` to the `develop`
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[queue](https://ncar-hpc-docs.readthedocs.io/en/latest/pbs/charging/#derecho-queues).
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If that doesn't help, link the init file from Kelly.
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```bash
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ln -s /glade/derecho/scratch/knocasio/mpas-africa/Africa.init.nc .
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```
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:::
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(africa-bc)=
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## Boundary conditions
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We will again skip creating [surface update](#sfc-update) files.
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:::{dropdown} Contingency
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Try switching from the `main` to the `develop`
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[queue](https://ncar-hpc-docs.readthedocs.io/en/latest/pbs/charging/#derecho-queues).
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If that doesn't help, link the LBC files from Kelly.
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```bash
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ln -s /glade/derecho/scratch/knocasio/mpas-africa/lbc.*.nc .
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```
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:::
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## Run the model
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Update `namelist.atmosphere` with these settings:

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