Add OBO alternativeLabel to indexed properties

arteymix · arteymix · commit 704c101ba7c7 · 2023-04-09T13:41:52.000-07:00
diff --git a/src/ubic/basecode/ontology/jena/search/IndexerSelector.java b/src/ubic/basecode/ontology/jena/search/IndexerSelector.java
@@ -48,6 +48,7 @@ public class IndexerSelector implements Selector {
         wantedForIndexing.add( OBO.hasBroadSynonym );
         wantedForIndexing.add( OBO.hasNarrowSynonym );
         wantedForIndexing.add( OBO.hasRelatedSynonym );
+        wantedForIndexing.add( OBO.alternativeLabel );
     }
 
     /*
diff --git a/src/ubic/basecode/ontology/jena/vocabulary/OBO.java b/src/ubic/basecode/ontology/jena/vocabulary/OBO.java
@@ -19,6 +19,7 @@ private static Property property( String name ) {
     public static final Property hasBroadSynonym = property( "hasBroadSynonm" );
     public static final Property hasNarrowSynonym = property( "hasNarrowSynonym" );
     public static final Property hasRelatedSynonym = property( "hasRelatedSynonym" );
+    public static final Property alternativeLabel = ResourceFactory.createProperty( "http://purl.obolibrary.org/obo/IAO_0000118" );
     public static final Resource ObsoleteClass = ResourceFactory.createResource( "http://www.geneontology.org/formats/oboInOwl#ObsoleteClass" );
     public static final Property ObsoleteProperty = ResourceFactory.createProperty( "http://www.geneontology.org/formats/oboInOwl#ObsoleteProperty" );
 }

Original file line number	Diff line number	Diff line change
`@@ -48,6 +48,7 @@ public class IndexerSelector implements Selector {`
`48`	`48`	`wantedForIndexing.add( OBO.hasBroadSynonym );`
`49`	`49`	`wantedForIndexing.add( OBO.hasNarrowSynonym );`
`50`	`50`	`wantedForIndexing.add( OBO.hasRelatedSynonym );`
	`51`	`+ wantedForIndexing.add( OBO.alternativeLabel );`
`51`	`52`	`}`
`52`	`53`
`53`	`54`	`/*`
Original file line number	Diff line number	Diff line change
`@@ -19,6 +19,7 @@ private static Property property( String name ) {`
`19`	`19`	`public static final Property hasBroadSynonym = property( "hasBroadSynonm" );`
`20`	`20`	`public static final Property hasNarrowSynonym = property( "hasNarrowSynonym" );`
`21`	`21`	`public static final Property hasRelatedSynonym = property( "hasRelatedSynonym" );`
	`22`	`+ public static final Property alternativeLabel = ResourceFactory.createProperty( "http://purl.obolibrary.org/obo/IAO_0000118" );`
`22`	`23`	`public static final Resource ObsoleteClass = ResourceFactory.createResource( "http://www.geneontology.org/formats/oboInOwl#ObsoleteClass" );`
`23`	`24`	`public static final Property ObsoleteProperty = ResourceFactory.createProperty( "http://www.geneontology.org/formats/oboInOwl#ObsoleteProperty" );`
`24`	`25`	`}`