From dc7f4c4d2232d259e1e6642019da6a330b877942 Mon Sep 17 00:00:00 2001 From: Marc Cruz Date: Mon, 8 Jun 2026 18:49:12 -0700 Subject: [PATCH 1/7] Created pyproject.toml files for collection_manager, common, config_operator, and granule ingester components --- .python-version | 1 + collection_manager/pyproject.toml | 7 + common/pyproject.toml | 7 + config_operator/pyproject.toml | 7 + granule_ingester/poetry.lock | 1626 ----------------------------- granule_ingester/pyproject.toml | 99 +- pyproject.toml | 28 + uv.lock | 867 +++++++++++++++ 8 files changed, 962 insertions(+), 1680 deletions(-) create mode 100644 .python-version create mode 100644 collection_manager/pyproject.toml create mode 100644 common/pyproject.toml create mode 100644 config_operator/pyproject.toml delete mode 100644 granule_ingester/poetry.lock create mode 100644 pyproject.toml create mode 100644 uv.lock diff --git a/.python-version b/.python-version new file mode 100644 index 0000000..2c07333 --- /dev/null +++ b/.python-version @@ -0,0 +1 @@ +3.11 diff --git a/collection_manager/pyproject.toml b/collection_manager/pyproject.toml new file mode 100644 index 0000000..8eb0d00 --- /dev/null +++ b/collection_manager/pyproject.toml @@ -0,0 +1,7 @@ +[project] +name = "collection_manager" +version = "0.1.0" +description = "TBD" +readme = "README" +requires-python = ">=3.11" +dependencies = [] \ No newline at end of file diff --git a/common/pyproject.toml b/common/pyproject.toml new file mode 100644 index 0000000..5dd54c6 --- /dev/null +++ b/common/pyproject.toml @@ -0,0 +1,7 @@ +[project] +name = "common" +version = "0.1.0" +description = "TBD" +readme = "README" +requires-python = ">=3.11" +dependencies = [] \ No newline at end of file diff --git a/config_operator/pyproject.toml b/config_operator/pyproject.toml new file mode 100644 index 0000000..9f8b446 --- /dev/null +++ b/config_operator/pyproject.toml @@ -0,0 +1,7 @@ +[project] +name = "config_operator" +version = "0.1.0" +description = "TBD" +readme = "README" +requires-python = ">=3.11" +dependencies = [] \ No newline at end of file diff --git a/granule_ingester/poetry.lock b/granule_ingester/poetry.lock deleted file mode 100644 index e1b05f5..0000000 --- a/granule_ingester/poetry.lock +++ /dev/null @@ -1,1626 +0,0 @@ -# This file is automatically @generated by Poetry 2.4.0 and should not be changed by hand. - 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See the NOTICE file distributed with -# this work for additional information regarding copyright ownership. -# The ASF licenses this file to You under the Apache License, Version 2.0 -# (the "License"); you may not use this file except in compliance with -# the License. You may obtain a copy of the License at -# -# http://www.apache.org/licenses/LICENSE-2.0 -# -# Unless required by applicable law or agreed to in writing, software -# distributed under the License is distributed on an "AS IS" BASIS, -# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -# See the License for the specific language governing permissions and -# limitations under the License. - -[tool.poetry] +[project] name = "sdap_granule_ingester" version = "1.4.0" description = "Ingester component for Apache SDAP" -authors = ["SDAP PMC "] -license = "Apache-2.0" +authors = [{ name = "SDAP PMC", email = "dev@sdap.apache.org" }] +requires-python = ">=3.11,<3.12" readme = "README.md" -packages = [ - { include = "granule_ingester" } +license = "Apache-2.0" +classifiers = [ + "Development Status :: 6 - Mature", + "Intended Audience :: Science/Research", + "Operating System :: OS Independent", + "Programming Language :: Python :: 3.11", + "License :: OSI Approved :: Apache Software License", + "Programming Language :: Python :: 3", ] -repository = "https://github.com/apache/incubator-sdap-ingester" -classifiers=[ - 'Development Status :: 6 - Mature', - 'Intended Audience :: Science/Research', - 'Operating System :: OS Independent', - 'Programming Language :: Python :: 3.11', - "License :: OSI Approved :: Apache Software License" +dependencies = [ + "cassandra-driver==3.30.0", + "aiomultiprocess==0.7.0", + "aioboto3==11.3.0", + "aiobotocore==2.6.0", + "boto3==1.28.17", + "tblib==1.6.0", + "pysolr==3.10.0", + "kazoo==2.8.0", + "aio-pika==6.7.1", + "elasticsearch[async]==8.11.0", + "urllib3==1.26.20", + "numpy>=1.26.4,<2", + "scipy>=1.11.4,<2", + "netcdf4>=1.6.5,<2", + "pandas>=2.1.4,<3", + "pytz>=2024.1,<2025", + "xarray", + "pyyaml==6.0.2", + "aiohttp>=3.8.0", + "tenacity==8.2.3", + "requests>=2.27.1", ] -[tool.poetry.dependencies] -python = ">=3.11,<3.12" -cassandra-driver = "3.30.0" -aiomultiprocess = "0.7.0" -aioboto3 = "11.3.0" -aiobotocore = 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"README" requires-python = ">=3.11" -dependencies = [] \ No newline at end of file +dependencies = [ + "aio-pika==6.7.1", + "aioboto3==11.3.0", + "aiobotocore==2.6.0", + "aiohttp==3.8.5", + "boto3==1.28.17", + "pysolr==3.10.0", + "pyyaml==6.0.2", + "requests==2.31.0", + "tenacity==8.2.3", + "urllib3==1.26.20", + "watchdog==0.10.2", + "yarl<=1.9.4", +] diff --git a/collection_manager/requirements.txt b/collection_manager/requirements.txt index daf25f1..ca7b95c 100644 --- a/collection_manager/requirements.txt +++ b/collection_manager/requirements.txt @@ -17,7 +17,7 @@ PyYAML==6.0.2 pysolr==3.10.0 watchdog==0.10.2 requests==2.31.0 -tenacity==6.2.0 +tenacity==8.2.3 aioboto3==11.3.0 aiobotocore==2.6.0 boto3==1.28.17 From c35cce900f58275219276fbf892e1abc6ab0c31d Mon Sep 17 00:00:00 2001 From: Marc Cruz Date: Mon, 8 Jun 2026 19:43:45 -0700 Subject: [PATCH 3/7] Migrated required dependencies for each component to their own pyproject.toml. dependencies are kept in uv.lock --- collection_manager/pyproject.toml | 25 +- common/pyproject.toml | 24 +- config_operator/pyproject.toml | 30 +- granule_ingester/pyproject.toml | 4 +- pyproject.toml | 20 +- uv.lock | 623 +++++++++++++++++++++--------- 6 files changed, 529 insertions(+), 197 deletions(-) diff --git a/collection_manager/pyproject.toml b/collection_manager/pyproject.toml index 5eb31fe..9875f6b 100644 --- a/collection_manager/pyproject.toml +++ b/collection_manager/pyproject.toml @@ -2,9 +2,11 @@ name = "collection_manager" version = "0.1.0" description = "TBD" -readme = "README" -requires-python = ">=3.11" +readme = "README.md" +requires-python = ">=3.11, <3.12" dependencies = [ + "common", + "aio-pika==6.7.1", "aioboto3==11.3.0", "aiobotocore==2.6.0", @@ -18,3 +20,22 @@ dependencies = [ "watchdog==0.10.2", "yarl<=1.9.4", ] + + +[dependency-groups] +dev = ["pytest>=7.1.2,<8"] + +[tool.uv] + +[tool.uv.build-backend] +module-name = ["collection_manager"] +module-root = "" + +[build-system] +requires = ["uv_build>=0.11.3,<0.12.0"] +build-backend = "uv_build" + +[tool.pytest.ini_options] +filterwarnings = [ + "ignore::DeprecationWarning", +] diff --git a/common/pyproject.toml b/common/pyproject.toml index 5dd54c6..1c93b41 100644 --- a/common/pyproject.toml +++ b/common/pyproject.toml @@ -2,6 +2,24 @@ name = "common" version = "0.1.0" description = "TBD" -readme = "README" -requires-python = ">=3.11" -dependencies = [] \ No newline at end of file +requires-python = ">=3.11, <3.12" +dependencies = [] + + +[dependency-groups] +dev = ["pytest>=7.1.2,<8"] + +[tool.uv] + +[tool.uv.build-backend] +module-name = ["common"] +module-root = "" + +[build-system] +requires = ["uv_build>=0.11.3,<0.12.0"] +build-backend = "uv_build" + +[tool.pytest.ini_options] +filterwarnings = [ + "ignore::DeprecationWarning", +] diff --git a/config_operator/pyproject.toml b/config_operator/pyproject.toml index 9f8b446..7c156d8 100644 --- a/config_operator/pyproject.toml +++ b/config_operator/pyproject.toml @@ -2,6 +2,30 @@ name = "config_operator" version = "0.1.0" description = "TBD" -readme = "README" -requires-python = ">=3.11" -dependencies = [] \ No newline at end of file +readme = "README.md" +requires-python = ">=3.11, <3.12" +dependencies = [ + "gitpython==3.1.2", + "kopf==0.26", + "kubernetes==11.0", +] + + +[dependency-groups] +dev = ["pytest>=7.1.2,<8"] + +[tool.uv] + +[tool.uv.build-backend] +module-name = ["config_operator"] +module-root = "" + +[build-system] +requires = ["uv_build>=0.11.3,<0.12.0"] +build-backend = "uv_build" + +[tool.pytest.ini_options] +filterwarnings = [ + "ignore::DeprecationWarning", +] + diff --git a/granule_ingester/pyproject.toml b/granule_ingester/pyproject.toml index 5c41ec0..cd4b208 100644 --- a/granule_ingester/pyproject.toml +++ b/granule_ingester/pyproject.toml @@ -1,5 +1,5 @@ [project] -name = "sdap_granule_ingester" +name = "granule_ingester" version = "1.4.0" description = "Ingester component for Apache SDAP" authors = [{ name = "SDAP PMC", email = "dev@sdap.apache.org" }] @@ -15,6 +15,8 @@ classifiers = [ "Programming Language :: Python :: 3", ] dependencies = [ + "common", + "cassandra-driver==3.30.0", "aiomultiprocess==0.7.0", "aioboto3==11.3.0", diff --git a/pyproject.toml b/pyproject.toml index 21ec18d..b6b0cf5 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -3,8 +3,10 @@ name = "sdap-ingester" version = "0.1.0" description = "TBD" readme = "README" -requires-python = ">=3.11" -dependencies = [] +requires-python = ">=3.11, <3.12" + +[tool.uv.workspace] +members = ["collection_manager", "common", "config_operator", "granule_ingester"] [tool.uv.sources] collection_manager = { workspace = true } @@ -12,17 +14,3 @@ common = { workspace = true } config_operator = { workspace = true } granule_ingester = { workspace = true } -[tool.setuptools.packages.find] -where = ["."] -include = [ - "common*", - "config_operator*", - "granule_ingester*", - "collection_manager*", -] - -[tool.uv.workspace] -members = 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the repository root: +# docker build -f collection_manager/docker/Dockerfile -t sdap-collection-manager . + FROM python:3.11-slim ARG KUBECTL_VERSION=v1.29.14 @@ -22,15 +25,27 @@ RUN apt-get update && apt-get install -y --no-install-recommends ca-certificates apt-get clean && \ rm -rf /var/lib/apt/lists/* -COPY VERSION.txt /VERSION.txt -COPY common /common -COPY collection_manager/collection_manager /collection_manager/collection_manager -COPY collection_manager/setup.py /collection_manager/setup.py -COPY collection_manager/requirements.txt /collection_manager/requirements.txt -COPY collection_manager/README.md /collection_manager/README.md -COPY collection_manager/docker/entrypoint.sh /entrypoint.sh +COPY --from=ghcr.io/astral-sh/uv:0.11.3 /uv /uvx /bin/ + +ENV UV_COMPILE_BYTECODE=1 \ + UV_LINK_MODE=copy \ + UV_PYTHON_DOWNLOADS=0 -RUN cd /common && pip install . -RUN cd /collection_manager && pip install . +WORKDIR /app +COPY pyproject.toml uv.lock ./ +COPY common/pyproject.toml common/ +COPY collection_manager/pyproject.toml collection_manager/ +COPY config_operator/pyproject.toml config_operator/ +COPY granule_ingester/pyproject.toml granule_ingester/ +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev --no-install-workspace --package collection_manager + +COPY common/ common/ +COPY collection_manager/ collection_manager/ +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev --package collection_manager + +ENV PATH="/app/.venv/bin:$PATH" +COPY collection_manager/docker/entrypoint.sh /entrypoint.sh ENTRYPOINT ["/bin/bash", "/entrypoint.sh"] diff --git a/collection_manager/docker/entrypoint.sh b/collection_manager/docker/entrypoint.sh index 648552e..e781a6f 100644 --- a/collection_manager/docker/entrypoint.sh +++ b/collection_manager/docker/entrypoint.sh @@ -16,7 +16,7 @@ # limitations under the License. -python /collection_manager/collection_manager/main.py \ +python /app/collection_manager/collection_manager/main.py \ $([[ ! -z "$COLLECTIONS_PATH" ]] && echo --collections-path=$COLLECTIONS_PATH) \ $([[ ! -z "$RABBITMQ_HOST" ]] && echo --rabbitmq-host=$RABBITMQ_HOST) \ $([[ ! -z "$RABBITMQ_USERNAME" ]] && echo --rabbitmq-username=$RABBITMQ_USERNAME) \ From 1d80688f7c4b0a2e51fd975bc09299700e44d15d Mon Sep 17 00:00:00 2001 From: Marc Cruz Date: Thu, 11 Jun 2026 12:24:24 -0700 Subject: [PATCH 5/7] Complete Docker uv migration for config_operator and granule_ingester MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit - Add .dockerignore; add .gitattributes (eol=lf) — CRLF broke the granule install_python shebang on Linux. - config_operator: kopf 0.26->1.42.5 + HandlerFatalError->PermanentError, bump kubernetes, install git for GitPython (3.11 compat). - granule_ingester: point UV_PYTHON at the venv so nexusproto installs there; override protobuf 3.2.0->3.20.3 for 3.11. - Re-lock uv.lock. --- .dockerignore | 48 +++++++++++++ .gitattributes | 11 +++ config_operator/config_operator/main.py | 45 ++++++------- config_operator/containers/docker/Dockerfile | 36 +++++++--- config_operator/pyproject.toml | 7 +- granule_ingester/docker/Dockerfile | 67 +++++++------------ granule_ingester/docker/entrypoint.sh | 2 +- granule_ingester/docker/install_nexusproto.sh | 11 ++- uv.lock | 55 ++++++--------- 9 files changed, 171 insertions(+), 111 deletions(-) create mode 100644 .dockerignore create mode 100644 .gitattributes diff --git a/.dockerignore b/.dockerignore new file mode 100644 index 0000000..278bebb --- /dev/null +++ b/.dockerignore @@ -0,0 +1,48 @@ +# Licensed to the Apache Software Foundation (ASF) under one or more +# contributor license agreements. See the NOTICE file distributed with +# this work for additional information regarding copyright ownership. +# The ASF licenses this file to You under the Apache License, Version 2.0 +# (the "License"); you may not use this file except in compliance with +# the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + +# Keep the Docker build context small and reproducible. The component +# Dockerfiles copy each package's source wholesale (e.g. COPY common/ common/), +# so anything not excluded here would otherwise leak into the image. + +# Version control +.git +.gitignore +.github + +# Local virtual environments (the image builds its own via `uv sync`) +.venv +**/.venv + +# Python build/runtime artifacts +**/__pycache__ +**/*.py[cod] +**/*.egg-info +**/*.egg +**/build +**/dist +.python-version + +# Test / tooling caches +**/.pytest_cache +**/.mypy_cache +**/.ruff_cache +.coverage +htmlcov + +# Editor / OS noise +.idea +.vscode +.DS_Store diff --git a/.gitattributes b/.gitattributes new file mode 100644 index 0000000..e6489fe --- /dev/null +++ b/.gitattributes @@ -0,0 +1,11 @@ +# Normalize line endings so Linux container builds are not broken by CRLF +# introduced on Windows checkouts. Shell scripts and Dockerfiles are executed +# inside Linux images and MUST stay LF regardless of core.autocrlf. +*.sh text eol=lf +*.bash text eol=lf +Dockerfile text eol=lf +entrypoint text eol=lf + +# uv lockfile is generated/consumed verbatim; keep it LF and untouched by +# end-of-line normalization heuristics. +uv.lock text eol=lf diff --git a/config_operator/config_operator/main.py b/config_operator/config_operator/main.py index 2302e7f..00e42e0 100644 --- a/config_operator/config_operator/main.py +++ b/config_operator/config_operator/main.py @@ -23,24 +23,25 @@ logger = logging.getLogger(__name__) -UPDATE_EVERY_SECOND_PROPERTY = 'update-every-seconds' +UPDATE_EVERY_SECOND_PROPERTY = "update-every-seconds" + def create_git_config_synchronizer(spec, namespace): - if 'git-url' not in spec.keys(): - raise kopf.HandlerFatalError(f"git-url must be set.") - if 'config-map' not in spec.keys(): - raise kopf.HandlerFatalError(f"config-map must be set.") + if "git-url" not in spec.keys(): + raise kopf.PermanentError(f"git-url must be set.") + if "config-map" not in spec.keys(): + raise kopf.PermanentError(f"config-map must be set.") - git_url = spec['git-url'] - logger.info(f'git-url = {git_url}') - config_map = spec['config-map'] - logger.info(f'config-map = {config_map}') + git_url = spec["git-url"] + logger.info(f"git-url = {git_url}") + config_map = spec["config-map"] + logger.info(f"config-map = {config_map}") _kwargs = {} - for k in {'git-branch', 'git-username', 'git-token', UPDATE_EVERY_SECOND_PROPERTY}: + for k in {"git-branch", "git-username", "git-token", UPDATE_EVERY_SECOND_PROPERTY}: if k in spec: - logger.info(f'{k} = {spec[k]}') - _kwargs[k.replace('-', '_')] = spec[k] + logger.info(f"{k} = {spec[k]}") + _kwargs[k.replace("-", "_")] = spec[k] config = RemoteGitConfig(git_url, **_kwargs) @@ -53,30 +54,28 @@ def create_git_config_synchronizer(spec, namespace): return msg -@kopf.on.create('sdap.apache.org', 'v1', 'gitbasedconfigs') +@kopf.on.create("sdap.apache.org", "v1", "gitbasedconfigs") def create_fn(body, spec, **kwargs): - logger.info(f'sdap git config operator creation') + logger.info(f"sdap git config operator creation") - namespace = body['metadata']['namespace'] + namespace = body["metadata"]["namespace"] msg = create_config_synchronizer(spec, namespace) - logger.info(f'sdap git config operator created {msg}') - - return {'message': msg} + logger.info(f"sdap git config operator created {msg}") + return {"message": msg} -@kopf.on.update('sdap.apache.org', 'v1', 'gitbasedconfigs') +@kopf.on.update("sdap.apache.org", "v1", "gitbasedconfigs") def update_fn(spec, status, namespace, **kwargs): - logger.info(f'sdap git config operator update') + logger.info(f"sdap git config operator update") msg = create_config_synchronizer(spec, namespace) - logger.info(f'sdap local config operator updated {msg}') - - return {'message': msg} + logger.info(f"sdap local config operator updated {msg}") + return {"message": msg} @kopf.on.login() diff --git a/config_operator/containers/docker/Dockerfile b/config_operator/containers/docker/Dockerfile index 485ea89..eefbf02 100644 --- a/config_operator/containers/docker/Dockerfile +++ b/config_operator/containers/docker/Dockerfile @@ -13,14 +13,34 @@ # See the License for the specific language governing permissions and # limitations under the License. -FROM python:3 +FROM python:3.11-slim -COPY /config_operator /config_operator/config_operator -COPY /setup.py /config_operator/setup.py -COPY /requirements.txt /config_operator/requirements.txt -COPY /README.md /config_operator/README.md +# GitPython (used by RemoteGitConfig) shells out to the git binary at import +# time; the slim base image does not ship it, so install it explicitly. +RUN apt-get update && \ + apt-get install --no-install-recommends -y git && \ + apt-get clean && \ + rm -rf /var/lib/apt/lists/* -RUN cd /config_operator && pip install . -COPY /config_operator/main.py /main.py +COPY --from=ghcr.io/astral-sh/uv:0.11.3 /uv /uvx /bin/ -CMD ["kopf", "run", "/main.py", "--verbose"] +ENV UV_COMPILE_BYTECODE=1 \ + UV_LINK_MODE=copy \ + UV_PYTHON_DOWNLOADS=0 + +WORKDIR /app + +COPY pyproject.toml uv.lock ./ +COPY common/pyproject.toml common/ +COPY collection_manager/pyproject.toml collection_manager/ +COPY config_operator/pyproject.toml config_operator/ +COPY granule_ingester/pyproject.toml granule_ingester/ +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev --no-install-workspace --package config_operator + +COPY config_operator/ config_operator/ +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev --package config_operator + +ENV PATH="/app/.venv/bin:$PATH" +CMD ["kopf", "run", "/app/config_operator/config_operator/main.py", "--verbose"] diff --git a/config_operator/pyproject.toml b/config_operator/pyproject.toml index 7c156d8..ac1cba8 100644 --- a/config_operator/pyproject.toml +++ b/config_operator/pyproject.toml @@ -6,8 +6,11 @@ readme = "README.md" requires-python = ">=3.11, <3.12" dependencies = [ "gitpython==3.1.2", - "kopf==0.26", - "kubernetes==11.0", + # kopf 0.26 (2020) cannot import on Python 3.11 (dataclass mutable-default + # error); 1.36+ adds 3.11 support. HandlerFatalError was renamed + # PermanentError in the 1.x line (see main.py). + "kopf>=1.36,<2", + "kubernetes>=27,<31", ] diff --git a/granule_ingester/docker/Dockerfile b/granule_ingester/docker/Dockerfile index bfe9dad..33a05cf 100644 --- a/granule_ingester/docker/Dockerfile +++ b/granule_ingester/docker/Dockerfile @@ -18,8 +18,6 @@ FROM eclipse-temurin:8 USER root COPY --chmod=755 granule_ingester/docker/install_python.sh /install_python.sh - -# Install python RUN /install_python.sh RUN ln -s /opt/python/3.11.15/bin/python3.11 /opt/python/3.11.15/bin/python @@ -30,55 +28,42 @@ RUN apt-get update && \ ENV PATH="/opt/python/3.11.15/bin:$PATH" -COPY VERSION.txt /VERSION.txt -COPY common /common -COPY granule_ingester/granule_ingester /sdap/granule_ingester -COPY granule_ingester/docker/install_nexusproto.sh /sdap/install_nexusproto.sh -COPY granule_ingester/docker/entrypoint.sh /entrypoint.sh +COPY --from=ghcr.io/astral-sh/uv:0.11.3 /uv /uvx /bin/ -COPY granule_ingester/README.md README LICENSE.txt NOTICE /sdap/ +ENV UV_COMPILE_BYTECODE=1 \ + UV_LINK_MODE=copy \ + UV_PYTHON_DOWNLOADS=0 \ + UV_PYTHON=/opt/python/3.11.15/bin/python3.11 -ENV PYTHONUNBUFFERED=1 \ - # prevents python creating .pyc files - PYTHONDONTWRITEBYTECODE=1 \ - \ - # pip - PIP_NO_CACHE_DIR=off \ - PIP_DISABLE_PIP_VERSION_CHECK=on \ - PIP_DEFAULT_TIMEOUT=100 \ - \ - # poetry - # https://python-poetry.org/docs/configuration/#using-environment-variables - POETRY_VERSION=1.5.1 \ - # make poetry install to this location - POETRY_HOME="/opt/poetry" \ - # make poetry create the virtual environment in the project's root - # it gets named `.venv` - POETRY_VIRTUALENVS_IN_PROJECT=true \ - # do not ask any interactive question - POETRY_NO_INTERACTION=1 \ - PYSETUP_PATH="/opt/pysetup" \ - \ - VENV_PATH="/sdap/.venv" \ - POETRY_CACHE_DIR="/opt/.cache/poetry" +WORKDIR /app -WORKDIR /sdap -COPY granule_ingester/poetry.lock granule_ingester/pyproject.toml ./ +COPY pyproject.toml uv.lock ./ +COPY common/pyproject.toml common/ +COPY collection_manager/pyproject.toml collection_manager/ +COPY config_operator/pyproject.toml config_operator/ +COPY granule_ingester/pyproject.toml granule_ingester/ +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev --no-install-workspace --package granule_ingester -ENV PATH="$POETRY_HOME/bin:$VENV_PATH/bin:$PATH" +COPY common/ common/ +COPY granule_ingester/ granule_ingester/ +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev --package granule_ingester -RUN curl -sSL https://install.python-poetry.org -o /tmp/install_poetry.py && \ - python /tmp/install_poetry.py && \ - poetry install --no-dev && \ - rm -rf $POETRY_CACHE_DIR && \ - python /tmp/install_poetry.py --uninstall && \ - rm /tmp/install_poetry.py +# The syncs above used UV_PYTHON to build the venv from the compiled base +# interpreter. From here on, point uv (and gradle's `python`) at the venv so +# install_nexusproto.sh installs nexusproto INTO /app/.venv rather than the +# base /opt/python interpreter that the runtime never uses. +ENV VIRTUAL_ENV="/app/.venv" \ + PATH="/app/.venv/bin:$PATH" \ + UV_PYTHON="/app/.venv/bin/python" ARG BUILD_NEXUSPROTO ARG APACHE_NEXUSPROTO=https://github.com/apache/incubator-sdap-nexusproto.git ARG APACHE_NEXUSPROTO_BRANCH=master +COPY --chmod=755 granule_ingester/docker/install_nexusproto.sh /app/install_nexusproto.sh RUN ./install_nexusproto.sh $APACHE_NEXUSPROTO $APACHE_NEXUSPROTO_BRANCH -RUN cd /common && pip install . +COPY granule_ingester/docker/entrypoint.sh /entrypoint.sh ENTRYPOINT ["/bin/bash", "/entrypoint.sh"] diff --git a/granule_ingester/docker/entrypoint.sh b/granule_ingester/docker/entrypoint.sh index 7802046..0f8e940 100644 --- a/granule_ingester/docker/entrypoint.sh +++ b/granule_ingester/docker/entrypoint.sh @@ -17,7 +17,7 @@ echo $IS_VERBOSE ; -python /sdap/granule_ingester/main.py \ +python /app/granule_ingester/granule_ingester/main.py \ $([[ ! -z "$RABBITMQ_HOST" ]] && echo --rabbitmq-host=$RABBITMQ_HOST) \ $([[ ! -z "$RABBITMQ_USERNAME" ]] && echo --rabbitmq-username=$RABBITMQ_USERNAME) \ $([[ ! -z "$RABBITMQ_PASSWORD" ]] && echo --rabbitmq-password=$RABBITMQ_PASSWORD) \ diff --git a/granule_ingester/docker/install_nexusproto.sh b/granule_ingester/docker/install_nexusproto.sh index e51d911..12b0ad5 100755 --- a/granule_ingester/docker/install_nexusproto.sh +++ b/granule_ingester/docker/install_nexusproto.sh @@ -29,6 +29,8 @@ if [ ! -z ${BUILD_NEXUSPROTO+x} ]; then git init git pull ${GIT_REPO} ${GIT_BRANCH} + uv pip install pip setuptools wheel + ./gradlew pythonInstall --info ./gradlew install --info @@ -37,5 +39,12 @@ if [ ! -z ${BUILD_NEXUSPROTO+x} ]; then cd .. rm -rf nexusproto else - pip install nexusproto + uv pip install nexusproto fi + +# nexusproto hard-pins protobuf==3.2.0 (2017), whose runtime references the +# removed collections.MutableMapping and cannot import on Python 3.11. Override +# it with the last 3.x protobuf, which is 3.11-compatible and still loads the +# nexusproto bindings. Must run AFTER nexusproto install, otherwise its == pin +# pulls 3.2.0 back in. +uv pip install "protobuf==3.20.3" diff --git a/uv.lock b/uv.lock index b1dcb6a..37530cb 100644 --- a/uv.lock +++ b/uv.lock @@ -101,15 +101,6 @@ wheels = [ { url = "https://files.pythonhosted.org/packages/10/a1/510b0a7fadc6f43a6ce50152e69dbd86415240835868bb0bd9b5b88b1e06/aioitertools-0.13.0-py3-none-any.whl", hash = "sha256:0be0292b856f08dfac90e31f4739432f4cb6d7520ab9eb73e143f4f2fa5259be", size = 24182, upload-time = "2025-11-06T22:17:06.502Z" }, ] -[[package]] -name = "aiojobs" -version = "1.4.0" -source = { registry = "https://pypi.org/simple" } -sdist = { url = "https://files.pythonhosted.org/packages/03/54/751969398e2039b4dc458fa153dc066a0f7337a5b480d58944f59b7b38ae/aiojobs-1.4.0.tar.gz", hash = "sha256:463665c75d1fcc46c78d44375c1034abf5e3f087894b0fc5ec4dd16ef90fdc98", size = 139598, upload-time = "2025-04-05T00:39:07.771Z" } -wheels = [ - { url = "https://files.pythonhosted.org/packages/ce/89/5a30b3c041712a8b2dadb5ccef2bae12a874469650c61c018705039699cd/aiojobs-1.4.0-py3-none-any.whl", hash = "sha256:e95eb0d10d1f6095aefb04d228d2b4b3747514503f26540de722c2228a8500ca", size = 9455, upload-time = "2025-04-05T00:39:06.279Z" }, -] - 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-Use a conda environment for example: - - $ conda create -n cmenv python=3.11 - $ conda activate cmenv +Python 3.11 and [uv](https://docs.astral.sh/uv/) (uv provisions and manages the +virtual environment). ## Building the service From `incubator-sdap-ingester`, run: - $ cd common && python setup.py install - $ cd ../collection_manager python setup.py install - + $ uv sync --package collection_manager + +This creates `.venv` with the `collection_manager` package and its dependencies. + ## Running the service From `incubator-sdap-ingester`, run: - $ python collection_manager/collection_manager/main.py -h + $ uv run --package collection_manager python collection_manager/collection_manager/main.py -h ### The Collections Configuration File @@ -111,9 +108,7 @@ the actual dimensions are referenced by index variables. ## Running the tests From `incubator-sdap-ingester/`, run: - $ cd common && python setup.py install - $ cd ../collection_manager && python setup.py install - $ pip install pytest && pytest + $ uv run --package collection_manager pytest collection_manager/tests ## Building the Docker image From `incubator-sdap-ingester`, run: diff --git a/collection_manager/requirements.txt b/collection_manager/requirements.txt deleted file mode 100644 index ca7b95c..0000000 --- a/collection_manager/requirements.txt +++ /dev/null @@ -1,27 +0,0 @@ -# Licensed to the Apache Software Foundation (ASF) under one or more -# contributor license agreements. See the NOTICE file distributed with -# this work for additional information regarding copyright ownership. -# The ASF licenses this file to You under the Apache License, Version 2.0 -# (the "License"); you may not use this file except in compliance with -# the License. You may obtain a copy of the License at -# -# http://www.apache.org/licenses/LICENSE-2.0 -# -# Unless required by applicable law or agreed to in writing, software -# distributed under the License is distributed on an "AS IS" BASIS, -# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -# See the License for the specific language governing permissions and -# limitations under the License. - -PyYAML==6.0.2 -pysolr==3.10.0 -watchdog==0.10.2 -requests==2.31.0 -tenacity==8.2.3 -aioboto3==11.3.0 -aiobotocore==2.6.0 -boto3==1.28.17 -aiohttp==3.8.5 -aio-pika==6.7.1 -urllib3==1.26.20 -yarl<=1.9.4 diff --git a/collection_manager/setup.py b/collection_manager/setup.py deleted file mode 100644 index 716ac9a..0000000 --- a/collection_manager/setup.py +++ /dev/null @@ -1,49 +0,0 @@ -# Licensed to the Apache Software Foundation (ASF) under one or more -# contributor license agreements. See the NOTICE file distributed with -# this work for additional information regarding copyright ownership. -# The ASF licenses this file to You under the Apache License, Version 2.0 -# (the "License"); you may not use this file except in compliance with -# the License. You may obtain a copy of the License at -# -# http://www.apache.org/licenses/LICENSE-2.0 -# -# Unless required by applicable law or agreed to in writing, software -# distributed under the License is distributed on an "AS IS" BASIS, -# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -# See the License for the specific language governing permissions and -# limitations under the License. - -import re - -import setuptools - -PACKAGE_NAME = "sdap_collection_manager" - -with open('../VERSION.txt', 'r') as f: - __version__ = f.readline() - -with open("README.md", "r") as fh: - long_description = fh.read() - -with open('requirements.txt', 'r') as f: - pip_requirements = f.readlines() - -setuptools.setup( - name=PACKAGE_NAME, - version=__version__, - author="Apache - SDAP", - author_email="dev@sdap.apache.org", - description="a helper to ingest data in sdap", - long_description=long_description, - long_description_content_type="text/markdown", - url="https://github.com/apache/incubator-sdap-ingester", - packages=setuptools.find_packages(), - classifiers=[ - "Programming Language :: Python :: 3", - "Operating System :: OS Independent", - "Development Status :: 4 - Beta", - ], - python_requires='>=3.11', - include_package_data=True, - install_requires=pip_requirements -) diff --git a/common/setup.py b/common/setup.py deleted file mode 100644 index 34cc4ba..0000000 --- a/common/setup.py +++ /dev/null @@ -1,36 +0,0 @@ -# Licensed to the Apache Software Foundation (ASF) under one or more -# contributor license agreements. See the NOTICE file distributed with -# this work for additional information regarding copyright ownership. -# The ASF licenses this file to You under the Apache License, Version 2.0 -# (the "License"); you may not use this file except in compliance with -# the License. You may obtain a copy of the License at -# -# http://www.apache.org/licenses/LICENSE-2.0 -# -# Unless required by applicable law or agreed to in writing, software -# distributed under the License is distributed on an "AS IS" BASIS, -# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -# See the License for the specific language governing permissions and -# limitations under the License. - -import re - -import setuptools - -PACKAGE_NAME = "sdap_ingester_common" - -setuptools.setup( - name=PACKAGE_NAME, - author="Apache - SDAP", - author_email="dev@sdap.apache.org", - description="a module of common functions for the sdap ingester components", - url="https://github.com/apache/incubator-sdap-ingester", - packages=setuptools.find_packages(), - classifiers=[ - "Programming Language :: Python :: 3", - "Operating System :: OS Independent", - "Development Status :: 4 - Beta", - ], - python_requires='>=3.11', - include_package_data=True -) diff --git a/config_operator/requirements.txt b/config_operator/requirements.txt deleted file mode 100644 index fdd7e09..0000000 --- a/config_operator/requirements.txt +++ /dev/null @@ -1,20 +0,0 @@ -# Licensed to the Apache Software Foundation (ASF) under one or more -# contributor license agreements. See the NOTICE file distributed with -# this work for additional information regarding copyright ownership. -# The ASF licenses this file to You under the Apache License, Version 2.0 -# (the "License"); you may not use this file except in compliance with -# the License. You may obtain a copy of the License at -# -# http://www.apache.org/licenses/LICENSE-2.0 -# -# Unless required by applicable law or agreed to in writing, software -# distributed under the License is distributed on an "AS IS" BASIS, -# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -# See the License for the specific language governing permissions and -# limitations under the License. - -GitPython==3.1.2 -kubernetes==11.0 -kopf==0.26 - - diff --git a/config_operator/setup.py b/config_operator/setup.py deleted file mode 100644 index 7c6dd36..0000000 --- a/config_operator/setup.py +++ /dev/null @@ -1,53 +0,0 @@ -# Licensed to the Apache Software Foundation (ASF) under one or more -# contributor license agreements. See the NOTICE file distributed with -# this work for additional information regarding copyright ownership. -# The ASF licenses this file to You under the Apache License, Version 2.0 -# (the "License"); you may not use this file except in compliance with -# the License. You may obtain a copy of the License at -# -# http://www.apache.org/licenses/LICENSE-2.0 -# -# Unless required by applicable law or agreed to in writing, software -# distributed under the License is distributed on an "AS IS" BASIS, -# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -# See the License for the specific language governing permissions and -# limitations under the License. - -import setuptools -import re - -PACKAGE_NAME = "config_operator" - -with open(f'./{PACKAGE_NAME}/__init__.py') as fi: - result = re.search(r'__version__\s*=\s*[\'"]([^\'"]*)[\'"]', fi.read()) -version = result.group(1) - - -with open("README.md", "r") as fh: - long_description = fh.read() - -with open('requirements.txt', 'r') as f: - requirements = f.readlines() - -setuptools.setup( - name=PACKAGE_NAME, - version=version, - author="Apache - SDAP", - author_email="dev@sdap.apache.org", - description="a service to synchronize git or local directory configuration with k8s configMap", - long_description=long_description, - long_description_content_type="text/markdown", - url="https://github.com/tloubrieu-jpl/incubator-sdap-nexus-ingestion-manager", - packages=setuptools.find_packages(), - classifiers=[ - "Programming Language :: Python :: 3", - "Operating System :: OS Independent", - "Development Status :: 4 - Beta", - ], - python_requires='>=3.6', - include_package_data=True, - install_requires=requirements, - entry_points={ - 'console_scripts': ['config-operator=config_operator.config_operator:main'] - } -) diff --git a/granule_ingester/README.md b/granule_ingester/README.md index 2ba649d..5d598f9 100644 --- a/granule_ingester/README.md +++ b/granule_ingester/README.md @@ -9,25 +9,26 @@ data to Cassandra and Solr. ## Prerequisites -Python 3.11 +Python 3.11 and [uv](https://docs.astral.sh/uv/) (uv provisions and manages the +virtual environment). ## Building the service From `incubator-sdap-ingester`, run: - $ cd common && python setup.py install - $ cd ../granule_ingester && python setup.py install - + + $ uv sync --package granule_ingester + +This creates `.venv` with the `granule_ingester` package and its dependencies. + ## Launching the service From `incubator-sdap-ingester`, run: - $ python granule_ingester/granule_ingester/main.py -h + $ uv run --package granule_ingester python granule_ingester/granule_ingester/main.py -h ## Running the tests From `incubator-sdap-ingester`, run: - $ cd common && python setup.py install - $ cd ../granule_ingester && python setup.py install - $ pip install pytest && pytest + $ uv run --package granule_ingester pytest granule_ingester/tests ## Building the Docker image From `incubator-sdap-ingester`, run: From 88ffd951168521e96f71a5060da798a7c19816b6 Mon Sep 17 00:00:00 2001 From: Marc Cruz Date: Mon, 15 Jun 2026 20:52:43 -0700 Subject: [PATCH 7/7] Updated version to reflect 1.4.0 in pyproject.toml files in uv.lock, collection_manager, common, config_operator, and granule_ingester components. Then updated README to reflect the uv implementations. --- CHANGELOG.md | 1 + collection_manager/README.md | 8 +- collection_manager/docker/Dockerfile | 4 +- collection_manager/pyproject.toml | 34 ++++++- common/pyproject.toml | 32 ++++++- config_operator/README.md | 14 ++- config_operator/pyproject.toml | 30 +++++- granule_ingester/pyproject.toml | 32 +++++-- pyproject.toml | 8 +- uv.lock | 132 +++++++++++++-------------- 10 files changed, 193 insertions(+), 102 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index fbfa2fc..38d8e85 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -10,6 +10,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 ### Changed - Properly handle skipping of remote collections when reloading the collections config in the CM. - SDAP-542: Updated collection manager and granule ingester build to python 3.11. +- SDAP-543: Migrated package and dependency management to a uv workspace with a single root `uv.lock`. This supersedes Poetry (SDAP-511), which had itself replaced the original setuptools (`setup.py`) plus `requirements.txt` install workflow. Component Docker builds now use `uv sync --package `. ### Deprecated ### Removed ### Fixed diff --git a/collection_manager/README.md b/collection_manager/README.md index 9af8735..46a0289 100644 --- a/collection_manager/README.md +++ b/collection_manager/README.md @@ -15,15 +15,15 @@ virtual environment). ## Building the service From `incubator-sdap-ingester`, run: - $ uv sync --package collection_manager + $ uv sync --package sdap_collection_manager -This creates `.venv` with the `collection_manager` package and its dependencies. +This creates `.venv` with the `sdap_collection_manager` package and its dependencies. ## Running the service From `incubator-sdap-ingester`, run: - $ uv run --package collection_manager python collection_manager/collection_manager/main.py -h + $ uv run --package sdap_collection_manager python collection_manager/collection_manager/main.py -h ### The Collections Configuration File @@ -108,7 +108,7 @@ the actual dimensions are referenced by index variables. ## Running the tests From `incubator-sdap-ingester/`, run: - $ uv run --package collection_manager pytest collection_manager/tests + $ uv run --package sdap_collection_manager pytest collection_manager/tests ## Building the Docker image From `incubator-sdap-ingester`, run: diff --git a/collection_manager/docker/Dockerfile b/collection_manager/docker/Dockerfile index 1d1e1ab..7e341de 100644 --- a/collection_manager/docker/Dockerfile +++ b/collection_manager/docker/Dockerfile @@ -39,12 +39,12 @@ COPY collection_manager/pyproject.toml collection_manager/ COPY config_operator/pyproject.toml config_operator/ COPY granule_ingester/pyproject.toml granule_ingester/ RUN --mount=type=cache,target=/root/.cache/uv \ - uv sync --frozen --no-dev --no-install-workspace --package collection_manager + uv sync --frozen --no-dev --no-install-workspace --package sdap_collection_manager COPY common/ common/ COPY collection_manager/ collection_manager/ RUN --mount=type=cache,target=/root/.cache/uv \ - uv sync --frozen --no-dev --package collection_manager + uv sync --frozen --no-dev --package sdap_collection_manager ENV PATH="/app/.venv/bin:$PATH" COPY collection_manager/docker/entrypoint.sh /entrypoint.sh diff --git a/collection_manager/pyproject.toml b/collection_manager/pyproject.toml index 9875f6b..326f5ef 100644 --- a/collection_manager/pyproject.toml +++ b/collection_manager/pyproject.toml @@ -1,11 +1,33 @@ +# Licensed to the Apache Software Foundation (ASF) under one or more +# contributor license agreements. See the NOTICE file distributed with +# this work for additional information regarding copyright ownership. +# The ASF licenses this file to You under the Apache License, Version 2.0 +# (the "License"); you may not use this file except in compliance with +# the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + [project] -name = "collection_manager" -version = "0.1.0" -description = "TBD" +name = "sdap_collection_manager" +version = "1.4.0" +description = "A helper that watches a YAML file stored on the filesystem, and all the directories listed in that file." +authors = [{ name = "SDAP PMC", email = "dev@sdap.apache.org" }] +requires-python = ">=3.11,<3.12" readme = "README.md" -requires-python = ">=3.11, <3.12" +license = "Apache-2.0" +classifiers=[ + "Programming Language :: Python :: 3", + "Operating System :: OS Independent", + "Development Status :: 4 - Beta", + ] dependencies = [ - "common", + "sdap_ingester_common", "aio-pika==6.7.1", "aioboto3==11.3.0", @@ -21,6 +43,8 @@ dependencies = [ "yarl<=1.9.4", ] +[project.urls] +Repository = "https://github.com/apache/incubator-sdap-ingester" [dependency-groups] dev = ["pytest>=7.1.2,<8"] diff --git a/common/pyproject.toml b/common/pyproject.toml index 1c93b41..e033043 100644 --- a/common/pyproject.toml +++ b/common/pyproject.toml @@ -1,10 +1,34 @@ +# Licensed to the Apache Software Foundation (ASF) under one or more +# contributor license agreements. See the NOTICE file distributed with +# this work for additional information regarding copyright ownership. +# The ASF licenses this file to You under the Apache License, Version 2.0 +# (the "License"); you may not use this file except in compliance with +# the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + [project] -name = "common" -version = "0.1.0" -description = "TBD" -requires-python = ">=3.11, <3.12" +name = "sdap_ingester_common" +version = "1.4.0" +description = "A module of common functions for the sdap ingester components" +authors = [{ name = "SDAP PMC", email = "dev@sdap.apache.org" }] +requires-python = ">=3.11,<3.12" +license = "Apache-2.0" +classifiers=[ + "Programming Language :: Python :: 3", + "Operating System :: OS Independent", + "Development Status :: 4 - Beta", + ] dependencies = [] +[project.urls] +Repository = "https://github.com/apache/incubator-sdap-ingester" [dependency-groups] dev = ["pytest>=7.1.2,<8"] diff --git a/config_operator/README.md b/config_operator/README.md index d102d10..fcc51bd 100644 --- a/config_operator/README.md +++ b/config_operator/README.md @@ -21,16 +21,20 @@ To update the configmap from the same directory run: # Developers - git clone ... - cd config_operator - pip install -e . - pytest -d +Python 3.11 and [uv](https://docs.astral.sh/uv/) (uv provisions and manages the +virtual environment). From `incubator-sdap-ingester`, run: + + uv sync --package config_operator + uv run --package config_operator pytest config_operator/tests # Containerization ## Docker - docker build . -f containers/docker/Dockerfile -t nexusjpl/config-operator:latest +From `incubator-sdap-ingester` (the build needs the repository root as context so +uv can resolve the workspace): + + docker build . -f config_operator/containers/docker/Dockerfile -t nexusjpl/config-operator:latest To publish the docker image on dockerhub do (step necessary for kubernetes deployment): diff --git a/config_operator/pyproject.toml b/config_operator/pyproject.toml index ac1cba8..54c1d08 100644 --- a/config_operator/pyproject.toml +++ b/config_operator/pyproject.toml @@ -1,9 +1,31 @@ +# Licensed to the Apache Software Foundation (ASF) under one or more +# contributor license agreements. See the NOTICE file distributed with +# this work for additional information regarding copyright ownership. +# The ASF licenses this file to You under the Apache License, Version 2.0 +# (the "License"); you may not use this file except in compliance with +# the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + [project] name = "config_operator" -version = "0.1.0" -description = "TBD" +version = "1.4.0" +description = "a service to synchronize git or local directory configuration with k8s configMap" readme = "README.md" -requires-python = ">=3.11, <3.12" +authors = [{ name = "SDAP PMC", email = "dev@sdap.apache.org" }] +requires-python = ">=3.11,<3.12" +license = "Apache-2.0" +classifiers=[ + "Programming Language :: Python :: 3", + "Operating System :: OS Independent", + "Development Status :: 4 - Beta", + ] dependencies = [ "gitpython==3.1.2", # kopf 0.26 (2020) cannot import on Python 3.11 (dataclass mutable-default @@ -13,6 +35,8 @@ dependencies = [ "kubernetes>=27,<31", ] +[project.urls] +Repository = "https://github.com/tloubrieu-jpl/incubator-sdap-nexus-ingestion-manager" [dependency-groups] dev = ["pytest>=7.1.2,<8"] diff --git a/granule_ingester/pyproject.toml b/granule_ingester/pyproject.toml index cd4b208..3e757c7 100644 --- a/granule_ingester/pyproject.toml +++ b/granule_ingester/pyproject.toml @@ -1,3 +1,18 @@ +# Licensed to the Apache Software Foundation (ASF) under one or more +# contributor license agreements. See the NOTICE file distributed with +# this work for additional information regarding copyright ownership. +# The ASF licenses this file to You under the Apache License, Version 2.0 +# (the "License"); you may not use this file except in compliance with +# the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + [project] name = "granule_ingester" version = "1.4.0" @@ -6,17 +21,16 @@ authors = [{ name = "SDAP PMC", email = "dev@sdap.apache.org" }] requires-python = ">=3.11,<3.12" readme = "README.md" license = "Apache-2.0" -classifiers = [ - "Development Status :: 6 - Mature", - "Intended Audience :: Science/Research", - "Operating System :: OS Independent", - "Programming Language :: Python :: 3.11", - "License :: OSI Approved :: Apache Software License", - "Programming Language :: Python :: 3", +classifiers=[ + 'Development Status :: 6 - Mature', + 'Intended Audience :: Science/Research', + 'Operating System :: OS Independent', + 'Programming Language :: Python :: 3.11', + "License :: OSI Approved :: Apache Software License" ] dependencies = [ - "common", - + "sdap_ingester_common", + "cassandra-driver==3.30.0", "aiomultiprocess==0.7.0", "aioboto3==11.3.0", diff --git a/pyproject.toml b/pyproject.toml index b6b0cf5..7582cc6 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,7 +1,7 @@ [project] name = "sdap-ingester" -version = "0.1.0" -description = "TBD" +version = "1.4.0" +description = "Software for ingesting data into SDAP NEXUS" readme = "README" requires-python = ">=3.11, <3.12" @@ -9,8 +9,8 @@ requires-python = ">=3.11, <3.12" members = ["collection_manager", "common", "config_operator", "granule_ingester"] [tool.uv.sources] -collection_manager = { workspace = true } -common = { workspace = true } +sdap_collection_manager = { workspace = true } +sdap_ingester_common = { workspace = true } config_operator = { workspace = true } granule_ingester = { workspace = true } diff --git a/uv.lock b/uv.lock index 37530cb..a4ef724 100644 --- a/uv.lock +++ b/uv.lock @@ -8,11 +8,11 @@ resolution-markers = [ [manifest] members = [ - "collection-manager", - "common", "config-operator", "granule-ingester", + "sdap-collection-manager", "sdap-ingester", + "sdap-ingester-common", ] [[package]] @@ -284,51 +284,6 @@ wheels = [ { url = "https://files.pythonhosted.org/packages/c7/0d/67e5b4109ea4a837e80daa87c2c696711955e40449a97e8926672534def2/click-8.4.1-py3-none-any.whl", hash = "sha256:482be17c6991b8c19c5429a1e995d9b0efdbb63172824c41f99965dc0ade8ec2", size = 116639, upload-time = "2026-05-22T04:08:35.26Z" }, ] -[[package]] -name = "collection-manager" -version = "0.1.0" -source = { editable = "collection_manager" } -dependencies = [ - { name = "aio-pika" }, - { name = "aioboto3" }, - { name = "aiobotocore" }, - { name = "aiohttp" }, - { name = "boto3" }, - { name = "common" }, - { name = "pysolr" }, - { name = "pyyaml" }, - { name = "requests" }, - { name = "tenacity" }, - { name = "urllib3" }, - { name = "watchdog" }, - { name = "yarl" }, -] - -[package.dev-dependencies] -dev = [ - { name = "pytest" }, -] - -[package.metadata] -requires-dist = [ - { name = "aio-pika", specifier = "==6.7.1" }, - { name = "aioboto3", specifier = "==11.3.0" }, - { name = "aiobotocore", specifier = "==2.6.0" }, - { name = "aiohttp", specifier = "==3.8.5" }, - { name = "boto3", specifier = "==1.28.17" }, - { name = "common", editable = "common" }, - { name = "pysolr", specifier = "==3.10.0" }, - { name = "pyyaml", specifier = "==6.0.2" }, - { name = "requests", specifier = "==2.31.0" }, - { name = "tenacity", specifier = "==8.2.3" }, - { name = "urllib3", specifier = "==1.26.20" }, - { name = "watchdog", specifier = "==0.10.2" }, - { name = "yarl", specifier = "<=1.9.4" }, -] - -[package.metadata.requires-dev] -dev = [{ name = "pytest", specifier = ">=7.1.2,<8" }] - [[package]] name = "colorama" version = "0.4.6" @@ -338,24 +293,9 @@ wheels = [ { url = "https://files.pythonhosted.org/packages/d1/d6/3965ed04c63042e047cb6a3e6ed1a63a35087b6a609aa3a15ed8ac56c221/colorama-0.4.6-py2.py3-none-any.whl", hash = "sha256:4f1d9991f5acc0ca119f9d443620b77f9d6b33703e51011c16baf57afb285fc6", size = 25335, upload-time = "2022-10-25T02:36:20.889Z" }, ] -[[package]] -name = "common" -version = "0.1.0" -source = { editable = "common" } - -[package.dev-dependencies] -dev = [ - { name = "pytest" }, -] - -[package.metadata] - -[package.metadata.requires-dev] -dev = [{ name = "pytest", specifier = ">=7.1.2,<8" }] - [[package]] name = "config-operator" -version = "0.1.0" +version = "1.4.0" source = { editable = "config_operator" } dependencies = [ { name = "gitpython" }, @@ -551,7 +491,6 @@ dependencies = [ { name = "aiomultiprocess" }, { name = "boto3" }, { name = "cassandra-driver" }, - { name = "common" }, { name = "elasticsearch", extra = ["async"] }, { name = "kazoo" }, { name = "netcdf4" }, @@ -562,6 +501,7 @@ dependencies = [ { name = "pyyaml" }, { name = "requests" }, { name = "scipy" }, + { name = "sdap-ingester-common" }, { name = "tblib" }, { name = "tenacity" }, { name = "urllib3" }, @@ -582,7 +522,6 @@ requires-dist = [ { name = "aiomultiprocess", specifier = "==0.7.0" }, { name = "boto3", specifier = "==1.28.17" }, { name = "cassandra-driver", specifier = "==3.30.0" }, - { name = "common", editable = "common" }, { name = "elasticsearch", extras = ["async"], specifier = "==8.11.0" }, { name = "kazoo", specifier = "==2.8.0" }, { name = "netcdf4", specifier = ">=1.6.5,<2" }, @@ -593,6 +532,7 @@ requires-dist = [ { name = "pyyaml", specifier = "==6.0.2" }, { name = "requests", specifier = ">=2.27.1" }, { name = "scipy", specifier = ">=1.11.4,<2" }, + { name = "sdap-ingester-common", editable = "common" }, { name = "tblib", specifier = "==1.6.0" }, { name = "tenacity", specifier = "==8.2.3" }, { name = "urllib3", specifier = "==1.26.20" }, @@ -974,11 +914,71 @@ wheels = [ { url = "https://files.pythonhosted.org/packages/68/7f/bdd79ceaad24b671543ffe0ef61ed8e659440eb683b66f033454dcee90eb/scipy-1.17.1-cp311-cp311-win_arm64.whl", hash = "sha256:9ecb4efb1cd6e8c4afea0daa91a87fbddbce1b99d2895d151596716c0b2e859d", size = 24599248, upload-time = "2026-02-23T00:17:34.561Z" }, ] +[[package]] +name = "sdap-collection-manager" +version = "1.4.0" +source = { editable = "collection_manager" } +dependencies = [ + { name = "aio-pika" }, + { name = "aioboto3" }, + { name = "aiobotocore" }, + { name = "aiohttp" }, + { name = "boto3" }, + { name = "pysolr" }, + { name = "pyyaml" }, + { name = "requests" }, + { name = "sdap-ingester-common" }, + { name = "tenacity" }, + { name = "urllib3" }, + { name = "watchdog" }, + { name = "yarl" }, +] + +[package.dev-dependencies] +dev = [ + { name = "pytest" }, +] + +[package.metadata] +requires-dist = [ + { name = "aio-pika", specifier = "==6.7.1" }, + { name = "aioboto3", specifier = "==11.3.0" }, + { name = "aiobotocore", specifier = "==2.6.0" }, + { name = "aiohttp", specifier = "==3.8.5" }, + { name = "boto3", specifier = "==1.28.17" }, + { name = "pysolr", specifier = "==3.10.0" }, + { name = "pyyaml", specifier = "==6.0.2" }, + { name = "requests", specifier = "==2.31.0" }, + { name = "sdap-ingester-common", editable = "common" }, + { name = "tenacity", specifier = "==8.2.3" }, + { name = "urllib3", specifier = "==1.26.20" }, + { name = "watchdog", specifier = "==0.10.2" }, + { name = "yarl", specifier = "<=1.9.4" }, +] + +[package.metadata.requires-dev] +dev = [{ name = "pytest", specifier = ">=7.1.2,<8" }] + [[package]] name = "sdap-ingester" -version = "0.1.0" +version = "1.4.0" source = { virtual = "." } +[[package]] +name = "sdap-ingester-common" +version = "1.4.0" +source = { editable = "common" } + +[package.dev-dependencies] +dev = [ + { name = "pytest" }, +] + +[package.metadata] + +[package.metadata.requires-dev] +dev = [{ name = "pytest", specifier = ">=7.1.2,<8" }] + [[package]] name = "setuptools" version = "82.0.1"