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Expand file tree Collapse file tree Original file line number Diff line number Diff line change 4949TreeProfiler is command-line tool for profiling metadata table into phylogenetic tree with descriptive analysis and output visualization
5050
5151## Installation
52- TreeProfiler requires to install ete4 toolkit v4
53-
54- #### Quick install via pip
52+ ### Dependencies
53+ TreeProfiler requires
54+ - Python version >= 3.7
55+ - ETE Toolkit v4
56+ - biopython
57+ - selenium
58+ - scipy
59+ - matplotlib
60+
61+ ### Quick install via pip
5562```
5663# Install ETE Toolkit v4
5764pip install https://github.com/etetoolkit/ete/archive/refs/tags/4.1.0-beta.tar.gz
5865
5966
60- # Install TreeProfilerdependencies
67+ # Install TreeProfiler dependencies
6168pip install biopython selenium scipy matplotlib
6269# Install TreeProfiler
6370pip install https://github.com/compgenomicslab/TreeProfiler/archive/refs/tags/v1.1.0.tar.gz
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