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docs/main/_downloads/0f113533ab91fdc7a2d4a0fc6041d301/phasorpy_fret.ipynb

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},
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"outputs": [],
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"source": [
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"import numpy\n\nfrom phasorpy.lifetime import phasor_from_fret_acceptor, phasor_from_fret_donor\nfrom phasorpy.phasor import phasor_to_polar\nfrom phasorpy.plot import plot_polar_frequency\n\nfrequency = numpy.logspace(0, 4, 64).reshape(-1, 1) # 1-10000 MHz\nfret_efficiency = numpy.array([0.05, 0.95]).reshape(1, -1) # 5% and 95%\ndonor_lifetime = 4.2\nacceptor_lifetime = 3.0\ndonor_fretting = 0.9\ndonor_bleedthrough = 0.1\nacceptor_bleedthrough = 0.1\n\n# phasor of donor channel\ndonor_real, donor_imag = phasor_from_fret_donor(\n frequency,\n donor_lifetime,\n fret_efficiency=fret_efficiency,\n donor_fretting=donor_fretting,\n)\n\n# phasor of acceptor channel\nacceptor_real, acceptor_imag = phasor_from_fret_acceptor(\n frequency,\n donor_lifetime,\n acceptor_lifetime,\n fret_efficiency=fret_efficiency,\n donor_fretting=donor_fretting,\n donor_bleedthrough=donor_bleedthrough,\n acceptor_bleedthrough=acceptor_bleedthrough,\n)\n\nplot_polar_frequency(\n frequency,\n *phasor_to_polar(donor_real, donor_imag),\n title='Donor channel',\n)"
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"import numpy\n\nfrom phasorpy.lifetime import phasor_from_fret_acceptor, phasor_from_fret_donor\nfrom phasorpy.phasor import phasor_to_polar\nfrom phasorpy.plot import plot_polar_frequency\n\nfrequency = numpy.logspace(0, 4, 64).reshape((-1, 1)) # 1-10000 MHz\nfret_efficiency = numpy.array([0.05, 0.95]).reshape((1, -1)) # 5% and 95%\ndonor_lifetime = 4.2\nacceptor_lifetime = 3.0\ndonor_fretting = 0.9\ndonor_bleedthrough = 0.1\nacceptor_bleedthrough = 0.1\n\n# phasor of donor channel\ndonor_real, donor_imag = phasor_from_fret_donor(\n frequency,\n donor_lifetime,\n fret_efficiency=fret_efficiency,\n donor_fretting=donor_fretting,\n)\n\n# phasor of acceptor channel\nacceptor_real, acceptor_imag = phasor_from_fret_acceptor(\n frequency,\n donor_lifetime,\n acceptor_lifetime,\n fret_efficiency=fret_efficiency,\n donor_fretting=donor_fretting,\n donor_bleedthrough=donor_bleedthrough,\n acceptor_bleedthrough=acceptor_bleedthrough,\n)\n\nplot_polar_frequency(\n frequency,\n *phasor_to_polar(donor_real, donor_imag),\n title='Donor channel',\n)"
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docs/main/_downloads/1b3c132ff7b40bb13bb60712fdfbc4bc/phasorpy_io.ipynb

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"cell_type": "markdown",
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"metadata": {},
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"Import required modules and functions:\n\n"
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"Import required modules, functions, and classes:\n\n"
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]
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},
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{
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docs/main/_downloads/388b7742c68a851ec3957bbea0808bd6/phasorpy_phasorplot.py

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plot = PhasorPlot(allquadrants=True, title='All quadrants')
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plot.show()
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# %%
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# Custom grid
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# -----------
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