Skip to content

Allow specifying the mask and bbox keys in the GraphArrayView#293

Draft
cmalinmayor wants to merge 2 commits into
royerlab:mainfrom
cmalinmayor:multiple-masks-per-node
Draft

Allow specifying the mask and bbox keys in the GraphArrayView#293
cmalinmayor wants to merge 2 commits into
royerlab:mainfrom
cmalinmayor:multiple-masks-per-node

Conversation

@cmalinmayor
Copy link
Copy Markdown

@cmalinmayor cmalinmayor commented May 22, 2026

We want to store two masks for each cell - the whole membrane and the nucleus segmentations - and display them both as GraphArrayViews in napari. This edit should keep the default behavior of "mask" and "bbox" if not specified, but allow you to specify.

Is there anywhere else in the repo where a single mask and bbox per node is assumed that I should be aware of to make sure I don't break any default behavior? @TeunHuijben @JoOkuma (tagging cause I can't request reviewers)

Second edit: immediately found more places when I tried to run a slightly different script, new commits coming 🙃

@cmalinmayor cmalinmayor force-pushed the multiple-masks-per-node branch from 7c56781 to 68bbb6a Compare May 22, 2026 14:29
@cmalinmayor
Copy link
Copy Markdown
Author

Force pushed to rebase onto rc3, so I can actually run tests without running into #294

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant