Added parentage functions#59

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add_parentage_functions

Commits on Apr 22, 2026

Merge pull request #58 from Breeding-Insight/development
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corrected importFrom statement in parentage functions and ped_check

josue.chinchilla
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josue.chinchilla
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updated NAMESPACE to reflect updated importFrom statements

josue.chinchilla
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Update R/check_ped.R

josuechinchilla
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Copilot
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Commits on Apr 24, 2026

updated error handling and reporting for check_ped, Also major improvement for documentation on check_ped

josue.chinchilla
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josue.chinchilla
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Commits on Apr 27, 2026

updated error handling and reporting for check_ped

josue.chinchilla
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josue.chinchilla
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updated parentage functions to work allow user to display NA or not, and to plot results.

josue.chinchilla
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Made edits suggested by autopilot

josue.chinchilla
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josue.chinchilla
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added edits suggested by copilot

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Commits on Apr 28, 2026

modified default params

josue.chinchilla
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josue.chinchilla
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Added authors fror functions and made headers concise

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Commits on May 20, 2026

staged comments for next push

josue.chinchilla
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josue.chinchilla
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removed zip option and added specific correction arguments

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Commits on May 22, 2026

finalzied refactoring according to CRAN standards

josue.chinchilla
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Updated functions and descriptions to be CRAN compliant and updatede documentations

josue.chinchilla
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josue.chinchilla
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Commits on May 26, 2026

updated parentage functions to standardize inputs and outputs

josue.chinchilla
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josue.chinchilla
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updated functions to work as a workflow accepting inputs from objects or file paths, updated documentation and test files

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josue.chinchilla
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Commits on May 29, 2026

updated find_parentage to exlcude self comparison and fix bug of ordering genotype matrices for comparisons. updated test file to accomodate nw arguments

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