chore(deps): update all non-major dependencies

[renovate]

ℹ️ Note

This PR body was truncated due to platform limits.

This PR contains the following updates:

Package	Change	Age	Confidence	Type	Update
astropy	7.2.0 → 7.2.2			project.dependencies	patch
docker/build-push-action	v7.2.0 → v7.3.0			action	minor
docker/dockerfile	1.7 → 1.25			syntax	minor
docker/login-action	v4.2.0 → v4.4.0			action	minor
docker/metadata-action	v6.1.0 → v6.2.0			action	minor
docker/setup-buildx-action	v4.1.0 → v4.2.0			action	minor
hypothesis (changelog)	6.155.2 → 6.156.6			project.optional-dependencies	minor
ipython	9.14.1 → 9.15.0			project.optional-dependencies	minor
jupyterlab (changelog)	4.5.9 → 4.6.1			project.optional-dependencies	minor
matplotlib	3.10.9 → 3.11.0			project.dependencies	minor
numba	0.65.1 → 0.66.0			project.dependencies	minor
numpy (changelog)	2.4.6 → 2.5.1			project.dependencies	minor
reproject	0.19.0 → 0.21.0			project.dependencies	minor
snakemake	9.22.0 → 9.23.1			project.optional-dependencies	minor
tqdm (changelog)	4.68.1 → 4.68.4			project.dependencies	patch

---

Release Notes

astropy/astropy (astropy)

v7.2.2

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https://docs.astropy.org/en/v7.2.2/changelog.html

v7.2.1

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See https://docs.astropy.org/en/v7.2.1/changelog.html

docker/build-push-action (docker/build-push-action)

v7.3.0

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docker/login-action (docker/login-action)

v4.4.0

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v4.3.0

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• Preserve names in esbuild bundle by @​crazy-max in #​1022
• Bump @​aws-sdk/client-ecr and @​aws-sdk/client-ecr-public to 3.1076.0 #​999 #​1030
• Bump @​docker/actions-toolkit from 0.90.0 to 0.92.0 in #​1004 #​1027
• Bump @​sigstore/core from 3.1.0 to 3.2.1 in #​1023
• Bump @​sigstore/verify from 3.1.0 to 3.1.1 in #​1029
• Bump http-proxy-agent and https-proxy-agent to 9.1.0 in #​1017
• Bump js-yaml from 4.1.1 to 5.2.0 in #​1028
• Bump sigstore from 4.1.0 to 4.1.1 in #​1031
• Bump tmp from 0.2.5 to 0.2.7 in #​1002
• Bump undici from 6.24.1 to 6.27.0 in #​1020
• Bump vite from 7.3.3 to 7.3.6 in #​1019

Full Changelog: docker/login-action@v4.2.0...v4.3.0

docker/metadata-action (docker/metadata-action)

v6.2.0

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docker/setup-buildx-action (docker/setup-buildx-action)

v4.2.0

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• Preserve names in esbuild bundle by @​crazy-max in #​572
• Bump @​actions/core from 3.0.0 to 3.0.1 in #​551
• Bump @​docker/actions-toolkit from 0.90.0 to 0.92.0 in #​557 #​580
• Bump @​sigstore/core from 3.1.0 to 3.2.1 in #​573
• Bump @​sigstore/verify from 3.1.0 to 3.1.1 in #​576
• Bump js-yaml from 4.1.1 to 5.2.0 in #​562
• Bump sigstore from 4.1.0 to 4.1.1 in #​577
• Bump tmp from 0.2.5 to 0.2.7 in #​556
• Bump undici from 6.25.0 to 6.27.0 in #​570
• Bump vite from 7.3.2 to 7.3.6 in #​569

Full Changelog: docker/setup-buildx-action@v4.1.0...v4.2.0

HypothesisWorks/hypothesis (hypothesis)

v6.156.6: Hypothesis version 6.156.6

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This patch fixes "GitHubArtifactDatabase" failing to download
artifacts due to a colliding "Authorization" header.

The canonical version of these notes (with links) is on readthedocs.

v6.156.5: Hypothesis version 6.156.5

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We now publish abi3 wheels for 32-bit linux and 32-bit windows.

The canonical version of these notes (with links) is on readthedocs.

v6.156.4: Hypothesis version 6.156.4

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In addition to our version-specific wheels, we now also publish "abi3"
wheels, built against the 3.10 stable ABI.

The canonical version of these notes (with links) is on readthedocs.

v6.156.3: Hypothesis version 6.156.3

Compare Source

Fix not uploading source distributions to PyPI, as of v6.156.0.

v6.156.2: Hypothesis version 6.156.2

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This patch fixes a KeyError in |GitHubArtifactDatabase| when reading an
artifact whose zip file contains no explicit directory entries, which is the
case for zips produced by actions/upload-artifact.

v6.156.1: Hypothesis version 6.156.1

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This patch fixes our build pipeline from v6.156.0, so that wheels are actually published.

v6.155.7: Hypothesis version 6.155.7

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This patch fixes a thread-safety bug where concurrent use of the same
strategy instance could error in rare cases. (issue #​4475).

The canonical version of these notes (with links) is on readthedocs.

v6.155.6: Hypothesis version 6.155.6

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This patch replaces some internal "%"-style string formatting with
f-strings. There is no user-visible change.

The canonical version of these notes (with links) is on readthedocs.

v6.155.5: Hypothesis version 6.155.5

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"dates()" now raises "InvalidArgument" if a "datetime" is passed as
"min_value" or "max_value". Because "datetime" is a subclass of
"date", such bounds were previously accepted and then failed with a
confusing "TypeError" while generating examples.

The canonical version of these notes (with links) is on readthedocs.

v6.155.4: Hypothesis version 6.155.4

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This patch removes a stray "print()" which fired whenever a "dates()"
filter was rewritten.

The canonical version of these notes (with links) is on readthedocs.

v6.155.3: Hypothesis version 6.155.3

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When using an alternative backend (such as hypothesis-crosshair),
Hypothesis no longer emits a "test_case" observation for an iteration
that the backend aborts via "BackendCannotProceed" before the test
body runs. Previously such an iteration -- for example when the
crosshair backend has exhausted its search paths -- could surface as a
spurious, draw-less "passed" observation with an empty representation,
even though the engine already discards the iteration entirely.

The canonical version of these notes (with links) is on readthedocs.

ipython/ipython (ipython)

v9.15.0

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jupyterlab/jupyterlab (jupyterlab)

v4.6.1

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4.6.1

(Full Changelog)

Enhancements made

• Include videos for PR-modified tests in UI reports #​18865 (@​MUFFANUJ)
• Add an optional widget ID to 'application:split-tab' command #​19077 (@​brichet)

Bugs fixed

• Fix moving cells: preserve output and execution state #​18874 (@​krassowski)
• Fix Ctrl + Shift + Z shortcut for redo #​19088 (@​krassowski)
• Fix Font Awesome icon rendering on buttons #​19091 (@​krassowski)
• Wait for launcher icons before screenshots #​19076 (@​MUFFANUJ)
• Fix multiple dropdown settings not rendering in the Setting Editor #​19092 (@​krassowski)
• Use anchor positioning for search box placement #​19055 (@​krassowski)
• Fix scrollToCell for cells not yet rendered in defer / contentVisibility modes #​18987 (@​Darshan808)
• Queue settings saves to avoid toggle race #​18864 (@​MUFFANUJ)

Maintenance and upkeep improvements

• Do not disable immutable installs #​18940 (@​krassowski)
• Add bot support for updating example snapshots #​19007 (@​MUFFANUJ)
• Split PR title spell check into pull_request workflow #​19059 (@​MUFFANUJ)
• Reconfigure 4.6.x branch #​19061 (@​krassowski)

Documentation improvements

• Document Mermaid support in Markdown cells #​18325 (@​Krish-876)

Other merged PRs

• Bump dompurify from 3.4.10 to 3.4.11 #​19056 (@​dependabot[bot])

Contributors to this release

The following people contributed discussions, new ideas, code and documentation contributions, and review.
See our definition of contributors.

(GitHub contributors page for this release)

@​brichet (activity) | @​Darshan808 (activity) | @​DTiming24 (activity) | @​krassowski (activity) | @​Krish-876 (activity) | @​MUFFANUJ (activity)

v4.6.0

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(Full Changelog)

New features added

• Support horizontal activity bars #​18832 (@​jtpio, @​krassowski)
• Expose cell index and cell count in the statusbar #​18708 (@​krassowski, @​jtpio)
• Allow moving sections between panels #​18703 (@​Darshan808, @​Carreau, @​brichet, @​jtpio, @​krassowski)
• Make the breadcrumbs in filebrowser editable + completion #​18571 (@​Carreau, @​krassowski)
• Add "Date Created" column to file browser #​18533 (@​ktaletsk, @​RRosio, @​cursoragent, @​krassowski)
• Add command and buttons to select previous/next last modified cell #​18210 (@​Yahiewi, @​brichet, @​krassowski)
• feat(completer): Add syntax highlighting for ghost text #​18073 (@​MUFFANUJ, @​Darshan808, @​jtpio, @​krassowski)

Deprecated features

• Replace deprecated keyCode with key #​18674 (@​IsabelParedes, @​krassowski)
• Drives: Deprecate the notion of defaultContentProvider #​18169 (@​martinRenou, @​brichet, @​jasongrout, @​jtpio, @​krassowski)

Enhancements made

• Update lumino to v2026.5.25 #​18942 (@​krassowski, @​jtpio)
• Improve scroll overlay icon placement #​18907 (@​krassowski, @​jtpio)
• Optimize resizing dock panels (with an opt-out) #​18877 (@​krassowski, @​Darshan808)
• Use resolvePath API for traceback path resolution #​18876 (@​MUFFANUJ, @​krassowski)
• Add loading animation for file browser refresh action #​18855 (@​Siddhazntx, @​krassowski)
• Upgrade Stylelint to v16 #​18848 (@​MUFFANUJ, @​krassowski)
• Add category-level ordering support for launcher sections via categoryRank #​18779 (@​tsharma-dev, @​MUFFANUJ, @​krassowski)
• File browser: replace Preferred icon to avoid confusion with Home #​18773 (@​tsharma-dev, @​Carreau, @​IsabelParedes, @​krassowski)
• Ask if the user wants to sanitize HTML export and send param to jupyter server #​18765 (@​Yann-P, @​krassowski)
• Add a setting to disable the dock panel padding #​18760 (@​jtpio, @​krassowski)
• Remove Simple Mode switch from the status bar #​18757 (@​jtpio, @​aarondr77, @​krassowski)
• Add toggle command for output scrolling #​18754 (@​itsmejay80, @​krassowski)
• Refactor shared document dirty state #​18739 (@​davidbrochart, @​SylvainCorlay, @​brichet, @​jtpio, @​krassowski)
• Restrict 1-6 shortcuts for converting cell to headings to Markdown cells #​18734 (@​krassowski, @​jtpio)
• Add "toggle hidden file" to command palette #​18732 (@​Carreau, @​krassowski)
• Add command and Command Palette entry for crumbs path edition #​18729 (@​Carreau, @​Copilot, @​krassowski)
• Integrate Plugin Playground into docs #​18726 (@​MUFFANUJ, @​Carreau, @​jtpio, @​krassowski)
• Allow reset query parameter with values (e.g. ?reset=1) #​18702 (@​tubaman, @​claude, @​itsmejay80, @​krassowski)
• Improve Keyboard Shortcuts in Settings Editor #​18655 (@​IsabelParedes, @​krassowski)
• Fix accessibility of Keyboard Shortcuts dialog #​18650 (@​IsabelParedes, @​jayaprajapatii, @​krassowski)
• Update default font family to honor macOS system-wide ui-monospace #​18647 (@​flaviomartins, @​krassowski)
• Add deletable toggle to common tools notebook widget #​18645 (@​cmarmo, @​krassowski)
• Improve focus indicators #​18619 (@​IsabelParedes, @​krassowski)
• Expose IDefaultFileBrowserRenderer to customize the default file browser renderer #​18600 (@​jtpio, @​krassowski)
• Persist file browser sort state in state DB #​18596 (@​statxc, @​krassowski)
• Add language pack installation support via Settings > Language menu #​18595 (@​bittoby, @​krassowski)
• Improve screen reader behavior in launcher/notebook and add tests #​18570 (@​autodots-AHassan, @​krassowski)
• Fall back to line comments when block comment syntax is unavailable #​18563 (@​altis0725, @​claude, @​krassowski)
• Render inline completion for all cursors #​18555 (@​MUFFANUJ, @​krassowski)
• Clear file browser filter when changing directories #​18548 (@​RRosio, @​Copilot, @​krassowski)
• Galata: fix fonts and font rendering for consistency #​18535 (@​krassowski, @​brichet, @​jtpio)
• ENH: terminal shift enter #​18523 (@​ianhi, @​jtpio, @​krassowski)
• Expand the file browser breadcrumbs when there is space available adaptively #​18430 (@​MUFFANUJ, @​krassowski)
• Add automated spell check for documentation #​18398 (@​MUFFANUJ, @​Copilot, @​krassowski)
• Add setting to paste code cells without their outputs #​18390 (@​MUFFANUJ, @​aaron-seq, @​krassowski, @​superlevure)
• Add setting to choose file name sort order in the file browser #​18388 (@​MUFFANUJ, @​krassowski)
• Add root option to limit FileDialog navigation to a subdirectory #​18372 (@​DeborahOlaboye, @​krassowski)
• Enable moving the console prompt if the console is visible #​18332 (@​brichet, @​krassowski)
• Allow preventing console title to update #​18331 (@​brichet, @​krassowski)
• Add Ctrl+B shortcut to toggle bold formatting in markdown cells #​18328 (@​MUFFANUJ, @​aaron-seq, @​jasongrout, @​krassowski)
• Added interrupt_mode to the Kernel Spec interface #​18307 (@​fleming79, @​krassowski)
• add better colour to improve visibility against the background #​18284 (@​MUFFANUJ, @​Darshan808)
• Add Ctrl + Y key binding for redo command on Windows and Linux #​18275 (@​soniya-malviy, @​Darshan808, @​krassowski)
• Add 'Open in Terminal' from file browser context menu #​18274 (@​MUFFANUJ, @​krassowski, @​raffaelemancuso)
• Error background configurable from theme settings #​18219 (@​brichet, @​krassowski)
• Add Find and replace command to the Edit menu #​18218 (@​Meriem-BenIsmail, @​brichet, @​krassowski)
• Debugger: Move the responsibility to set the current source to the sources model #​18213 (@​HaudinFlorence, @​brichet, @​jtpio, @​krassowski, @​martinRenou)
• Styling of settings array buttons #​18211 (@​brichet, @​krassowski)
• Add commands to split main area widgets #​18192 (@​Meriem-BenIsmail, @​brichet, @​jtpio, @​krassowski)
• Add a "Stop Debugger" button to the paused overlay #​18184 (@​arjxn-py, @​jtpio, @​krassowski, @​martinRenou)
• Add confirmation step for cell toolbar "delete" button #​18182 (@​MUFFANUJ, @​Darshan808, @​krassowski)
• Detect and log slow plugins #​18181 (@​Darshan808, @​jtpio, @​krassowski)
• Add the 'jupyterlab' entry point #​18158 (@​brichet, @​jasongrout, @​jtpio)
• Make Kernel Info timeout editable #​18137 (@​linlol, @​Darshan808, @​jtpio, @​krassowski)
• Add a setting to show file filter bar by default #​18104 (@​MUFFANUJ, @​Darshan808, @​krassowski)
• Automatically refresh Kernel Sources after cell execution #​18081 (@​arjxn-py, @​Darshan808, @​krassowski, @​martinRenou)
• Move Kernel Sources filter bar to toolbar and enable live filtering #​18079 (@​arjxn-py, @​jtpio, @​krassowski, @​martinRenou)
• Improve the error message provided when jupyterhub is missing #​18060 (@​frenzymadness, @​Darshan808, @​hroncok, @​krassowski)
• Add copy/paste/cut for text in the notebook context menu #​18030 (@​Meriem-BenIsmail, @​krassowski)
• Debugger: display sources in main area widgets #​17986 (@​HaudinFlorence, @​RRosio, @​SylvainCorlay, @​brichet, @​jtpio, @​krassowski, @​martinRenou)
• Use no-op manager if terminals are unavailable #​17930 (@​krassowski, @​jasongrout, @​jtpio)

Bugs fixed

• Fix flaky filebrowser filter navigation test #​19015 (@​MUFFANUJ, @​krassowski)
• Forbid relative URLs in extensionmanager #​19013 (@​Yann-P, @​krassowski)
• Avoid debugger toolbar button flicker during kernel startup #​19006 (@​MUFFANUJ, @​krassowski)
• Fix XSS in extension manager's homepage_url #​19003 (@​Yann-P, @​krassowski)
• Fix too eager autocompletion heuristics #​19000 (@​MUFFANUJ, @​krassowski)
• Fix toolbar popup row clipping in Safari #​18998 (@​arun-357, @​krassowski)
• Fix HTMLSelect dropdown icon misalignment in toolbar popup #​18996 (@​arun-357, @​claude, @​krassowski)
• Fix hidden cells after moving collapsed headings #​18992 (@​MUFFANUJ, @​krassowski)
• Deduplicate concurrent LSP document connects by URI #​18980 (@​MUFFANUJ, @​krassowski)
• Fix scrolling to heading in ToC, workspace opening and flaky UI tests #​18961 (@​krassowski, @​jtpio)
• Fix read-only indicator #​18960 (@​davidbrochart, @​jtpio, @​krassowski)
• Forward port CodeMirror DOM compatibility patch #​18947 (@​krassowski, @​Darshan808)
• Prevent dialog from hanging when getValue() throws #​18938 (@​AliMahmoudDev, @​krassowski)
• Add packaging min version pin #​18910 (@​krassowski, @​Darshan808)
• Theme the CSV viewer scrollbar in dark themes #​18892 (@​dhgoal, @​Darshan808, @​krassowski)
• Use TabBarSvg.titleLabel fallback in Open Tabs panel #​18883 (@​dhgoal, @​krassowski)
• Fix execution state and outputs after undo #​18873 (@​krassowski, @​Darshan808)
• Accept aborted status in IReplyAbortContent #​18871 (@​dhgoal, @​krassowski)
• Treat TypeDoc validation warnings as errors and and TSDoc linting #​18859 (@​MUFFANUJ, @​krassowski)
• Fix opening notebook without a kernel if the kernel already exists by adding shouldReuse preference #​18856 (@​MUFFANUJ, @​krassowski)
• Use CSS anchor for prompt overlay #​18840 (@​CrafterKolyan, @​krassowski)
• Fix PanelWithToolbar: use optional toolbar in constructor options #​18824 (@​brichet, @​krassowski)
• Fix Kernel Sources tab reuse and line highlighting behavior #​18809 (@​MUFFANUJ, @​krassowski)
• Fix notebook hang when dropping cells #​18808 (@​MUFFANUJ, @​Meriem-BenIsmail, @​krassowski)
• Fix PageConfig.getUrl to honor explicit workspace option #​18791 (@​boskodev790, @​krassowski)
• Fix keyboard navigation for file browser bread crumbs #​18767 (@​IsabelParedes, @​krassowski)
• Fix native context menu blocked even when context menu is suppressed #​18753 (@​utsav-develops, @​krassowski)
• Fix Contextual Help keyboard shortcut reliability and menu Help functionality #​18747 (@​itsmejay80, @​Copilot, @​claude, @​krassowski)
• Fix focusing input element when opening a dialog from Command Palette #​18735 (@​Carreau, @​krassowski)
• Fix inconsistent width measurement for breadcrumbs #​18728 (@​Carreau, @​krassowski)
• Fix keyboard navigation (tab trap) for terminal #​18706 (@​IsabelParedes, @​krassowski)
• Contents Manager: Allow force renaming #​18681 (@​martinRenou, @​krassowski)
• Fix ability to render cells as read-only via notebook factory override #​18680 (@​krassowski, @​brichet)
• Fix inline completer space reservation settings having no effect #​18662 (@​moktamd, @​krassowski)
• Fix version of core.package.json in @jupyterlab/core-meta #​18657 (@​Darshan808, @​krassowski)
• Video and Audio Content Providers: Fix JupyterLite support #​18652 (@​martinRenou, @​jtpio, @​krassowski)
• Fix heading undo issue #​18646 (@​tsharma-dev, @​MUFFANUJ, @​krassowski)
• Deactivate the delete cell command icon on non deletable cells #​18640 (@​cmarmo, @​krassowski, @​nthiery)
• Fix keyboard navigation for console #​18638 (@​IsabelParedes, @​krassowski)
• Fix flaky toolbar item placement in popup #​18618 (@​filipeoliveira05, @​brichet, @​krassowski)
• Harmonize translation wrappers in Python files to use gettext methods #​18597 (@​tmetzl, @​krassowski)
• Remove unimplemented filebrowser:search command #​18593 (@​krassowski, @​jtpio)
• Fix filebrowser:create-new-file context menu selector #​18588 (@​jtpio, @​krassowski)
• Fix status bar focus outlines #​18585 (@​IsabelParedes, @​krassowski)
• Prevent split/merge on non-editable cells #​18579 (@​MUFFANUJ, @​krassowski)
• Fix single-character code blocks rendering as empty #​18572 (@​soniya-malviy, @​krassowski)
• Hide code input in CodeConsole when configured #​18554 (@​agriyakhetarpal, @​krassowski)
• Use a font size and family specified in CSS for DataGrids #​18542 (@​krassowski, @​Carreau, @​brichet)
• Fix font-family application across UI components and remove a single hard-coded usage #​18541 (@​krassowski, @​Carreau, @​jtpio)
• Fix comms subshell resource management on disposal and when changing settings #​18531 (@​krassowski, @​Carreau, [@​Copilot](https://redire

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