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AF3 minimal == slim: compress non-best confidences, never delete AlphaPulldown-CI-CD #1629: Commit 751373c pushed by DimaMolod
21m 2s main
main
21m 2s
Add --storage_mode preset to optimize AF2/AF3 output footprint AlphaPulldown-CI-CD #1628: Pull request #627 synchronize by DimaMolod
2m 56s storage-mode-optimization
storage-mode-optimization
2m 56s
Add --storage_mode preset to optimize AF2/AF3 output footprint AlphaPulldown-CI-CD #1627: Pull request #627 opened by DimaMolod
3m 30s storage-mode-optimization
storage-mode-optimization
3m 30s
AlphaPulldown v2.5.0 AlphaPulldown-CI-CD #1626: Release 2.5.0 published by DimaMolod
20m 59s
20m 59s
Release 2.5.0: AlphaFold3 v3.0.3 (RTX/Blackwell Tokamax stack) AlphaPulldown-CI-CD #1625: Commit 1c99b15 pushed by DimaMolod
20m 35s main
main
20m 35s
Release 2.5.0: AlphaFold3 v3.0.3 (RTX/Blackwell Tokamax stack) AlphaPulldown-CI-CD #1624: Pull request #626 opened by DimaMolod
3m 9s release-2.5.0
release-2.5.0
3m 9s
Update AlphaFold3 submodule to v3.0.3 (RTX/Blackwell Tokamax stack) AlphaPulldown-CI-CD #1623: Commit 855fc0b pushed by DimaMolod
21m 24s main
main
21m 24s
[codex] Update AlphaFold3 submodule to v3.0.3 AlphaPulldown-CI-CD #1622: Pull request #625 synchronize by DimaMolod
2m 45s codex/update-af3-v3.0.3
codex/update-af3-v3.0.3
2m 45s
[codex] Update AlphaFold3 submodule to v3.0.3 AlphaPulldown-CI-CD #1621: Pull request #625 synchronize by DimaMolod
3m 15s codex/update-af3-v3.0.3
codex/update-af3-v3.0.3
3m 15s
[codex] Update AlphaFold3 submodule to v3.0.3 AlphaPulldown-CI-CD #1620: Pull request #625 opened by DimaMolod
2m 38s codex/update-af3-v3.0.3
codex/update-af3-v3.0.3
2m 38s
Release 2.4.1: document use_precomputed_msas for local MMseqs2; add #… AlphaPulldown-CI-CD #1619: Commit 5f2454f pushed by DimaMolod
21m 22s main
main
21m 22s
AlphaPulldown v2.4.1 AlphaPulldown-CI-CD #1618: Release 2.4.1 published by DimaMolod
19m 28s
19m 28s
Fix CI: unpin chex and fetch submodules for AF3 container build AlphaPulldown-CI-CD #1617: Commit d648894 pushed by DimaMolod
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main
28m 39s
[codex] Update AlphaFold3 to Tokamax v3.0.2 AlphaPulldown-CI-CD #1616: Pull request #623 synchronize by DimaMolod
3m 4s codex/update-af3-tokamax-rtx
codex/update-af3-tokamax-rtx
3m 4s
[codex] Update AlphaFold3 to Tokamax v3.0.2 AlphaPulldown-CI-CD #1615: Pull request #623 opened by DimaMolod
3m 5s codex/update-af3-tokamax-rtx
codex/update-af3-tokamax-rtx
3m 5s
Re-pin numpy<2 after jax install in alphafold2 dockerfile AlphaPulldown-CI-CD #1614: Commit 9d26834 pushed by DimaMolod
16m 16s main
main
16m 16s
Re-pin numpy<2 after jax install in alphafold2 dockerfile AlphaPulldown-CI-CD #1613: Pull request #622 opened by DimaMolod
3m 25s fix/af2-dockerfile-numpy2
fix/af2-dockerfile-numpy2
3m 25s
Update AL base image in Dockerfile to nvidia/cuda AlphaPulldown-CI-CD #1612: Commit 26ec6f2 pushed by DimaMolod
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main
15m 30s
Fix #619 AlphaPulldown-CI-CD #1611: Commit ccaf51c pushed by DimaMolod
16m 10s main
main
16m 10s
docs: point Snakemake install docs at 2.5.0 AlphaPulldown-CI-CD #1610: Commit 1d940d0 pushed by DimaMolod
16m 58s main
main
16m 58s
docs: point Snakemake deploy tag and env file to release 2.4.0 AlphaPulldown-CI-CD #1609: Commit 4577f56 pushed by DimaMolod
15m 41s main
main
15m 41s
docs: sync structure-inference SLURM options + point to release 2.4.0 AlphaPulldown-CI-CD #1608: Pull request #618 opened by DimaMolod
2m 34s docs/sync-inference-config-from-snakemake
docs/sync-inference-config-from-snakemake
2m 34s
Fix mocked precomputed MMseq A3M in integration test AlphaPulldown-CI-CD #1607: Commit 716c061 pushed by DimaMolod
8m 5s main
main
8m 5s
Codex/mmseq precomputed enrichment AlphaPulldown-CI-CD #1606: Pull request #615 synchronize by DimaMolod
3m 8s codex/mmseq-precomputed-enrichment
codex/mmseq-precomputed-enrichment
3m 8s
Codex/mmseq precomputed enrichment AlphaPulldown-CI-CD #1605: Pull request #615 synchronize by DimaMolod
3m 6s codex/mmseq-precomputed-enrichment
codex/mmseq-precomputed-enrichment
3m 6s