Cardiac Mapping analysis tool
A GUI based program to rapidly analyze optical mapping data (Calcium and Voltage) Written by Rafael Jaimes III, PhD The goal of camat is to automate optical mapping analysis as much as possible. A secondary goal is to support as many filetypes and datatypes as possible. Currently, work has been done to support Zeiss, Nikon, Andor, and plain txt files for both calcium and voltage maps. See the homepage http://www.cardiacmap.com for more information, or contact the author at raf @ website.
Dependencies:
- MATLAB
- Signal Processing Toolbox
- Curve Fitting Toolbox
- System Identification Toolbox
- Optimization Toolbox
- Simulink Control Design
- Statistics and Machine Learning Toolbox
- Computer Vision System Toolbox
The usage of this software can be cited with:
Jaimes, R. 3rd, Walton, R. D., Pasdois, P., Bernus, O., Efimov, I. R., & Kay, M. W. (2016). A technical review of optical mapping of intracellular calcium within myocardial tissue. American Journal of Physiology - Heart and Circulatory Physiology, 310(11), H1388–H1401. http://doi.org/10.1152/ajpheart.00665.2015