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Is it BND only a TRA, or could it be both a TRA and an INV?

Status: Open.

#403 In arq5x/lumpy-sv;

· yougulianren opened on Oct 16, 2025

[BUG] Failed to compile htslib.

Status: Open.

#402 In arq5x/lumpy-sv;

· wjunLu opened on Jun 23, 2025

Does lumpy filter out multiple alleles？

Status: Open.

#401 In arq5x/lumpy-sv;

· hhd1008611 opened on Sep 21, 2024

lumpy fails to call tandem duplications that are shorter than the sequencing read length

Status: Open.

#400 In arq5x/lumpy-sv;

· ruomu-helix opened on Sep 19, 2024

Lumpyexpress memory issue

Status: Open.

#399 In arq5x/lumpy-sv;

· jordimaggi opened on Aug 9, 2024

how are the options '-m', '-mw' and '-msw' defined?

Status: Open.

#398 In arq5x/lumpy-sv;

· yqlan opened on Jun 13, 2024

windows for lumpyexpress

Status: Open.

#397 In arq5x/lumpy-sv;

· licongge opened on May 16, 2024

run lumpy without speedseq

Status: Open.

#396 In arq5x/lumpy-sv;

· RafigaM opened on May 7, 2024

Makefile - update BamTools to compile

Status: Open.

#395 In arq5x/lumpy-sv;

· DavidStreid opened on Mar 18, 2024

Input BAM file not found

Status: Open.

#394 In arq5x/lumpy-sv;

· espelpz opened on Feb 21, 2024

Missing pair end parameters:bamfile, histo_file, mean, stdev, read_length, min_non_overlap, discordant_z

Status: Open.

#393 In arq5x/lumpy-sv;

· psardana22 opened on Feb 8, 2024

Lumpyexpress produces zero INS and CNV

Status: Open.

#392 In arq5x/lumpy-sv;

· changhan1110 opened on Jul 4, 2023