fix: backport conda-forge build fixes - #5985
Closed
njzjz-bot wants to merge 2 commits into
Closed
Conversation
Backport the deepmd-kit-targeted patches from conda-forge/deepmd-kit-feedstock@d021382. The CUDA fatbin patch is intentionally excluded because it targets the separate LAMMPS source tree. Agent: ChatGPT Model: GPT-5.6 Sol
for more information, see https://pre-commit.ci
This was referenced Aug 22, 2026
Codecov Report✅ All modified and coverable lines are covered by tests. Additional details and impacted files@@ Coverage Diff @@
## master #5985 +/- ##
==========================================
- Coverage 79.10% 78.84% -0.26%
==========================================
Files 1105 1105
Lines 130981 130981
Branches 4771 4771
==========================================
- Hits 103609 103273 -336
- Misses 25686 26024 +338
+ Partials 1686 1684 -2 ☔ View full report in Codecov by Harness. 🚀 New features to boost your workflow:
|
pull Bot
pushed a commit
to ishandutta2007/deepmd-kit
that referenced
this pull request
Aug 28, 2026
## Summary Backport `0005-share-lammps-kokkos-runtime.patch` from `conda-forge/deepmd-kit-feedstock@d02138263b0b30629fe28c68c8bcecc2b8644513`. A runtime LAMMPS plugin should reuse the Kokkos runtime already linked into `liblammps`. Linking `Kokkos::kokkos` again can create a second CUDA/Kokkos runtime instance and corrupt shutdown state when the plugin unloads. Import the Kokkos include paths, compile definitions/options/features, and link options needed for device compilation while leaving runtime Kokkos symbols to `liblammps`; retain the CUDA and `LIBDL` helper targets when available. ## Validation - Single-file backport matching the feedstock patch. - Split from deepmodeling#5985 so the runtime-linking change can be reviewed independently. - Full build/runtime validation is left to upstream CI. Agent: ChatGPT Model: GPT-5.6 Sol <!-- This is an auto-generated comment: release notes by coderabbit.ai --> ## Summary by CodeRabbit * **Bug Fixes** * Improved Kokkos plugin build configuration by correctly inheriting required include paths, compiler settings, and linker options. * Added conditional support for CUDA and dynamic loading capabilities when available. <!-- end of auto-generated comment: release notes by coderabbit.ai --> --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
pull Bot
pushed a commit
to ishandutta2007/deepmd-kit
that referenced
this pull request
Aug 28, 2026
## Summary Backport `0002-support-lammps-2025-kokkos-api.patch` from `conda-forge/deepmd-kit-feedstock@d02138263b0b30629fe28c68c8bcecc2b8644513`. Support both the LAMMPS 22Jul2025 Kokkos API and newer LAMMPS releases by selecting the appropriate reverse-communication buffer and per-atom energy accumulator types from `LAMMPS_VERSION_NUMBER`. ## Validation - Four-file backport matching the feedstock patch. - Split from deepmodeling#5985 so the compatibility change can be reviewed independently. - Full build is left to upstream CI. Agent: ChatGPT Model: GPT-5.6 Sol <!-- This is an auto-generated comment: release notes by coderabbit.ai --> ## Summary by CodeRabbit - **Compatibility** - Improved support across multiple LAMMPS versions for Kokkos-based DeepMD and DPA-4-spin simulations. - Updated reverse communication and per-atom energy handling to use version-compatible data formats. - **Bug Fixes** - Resolved compatibility issues that could affect reverse communication and energy accumulation across LAMMPS releases. - Preserved existing force, magnetic-force, and virial calculation behavior. <!-- end of auto-generated comment: release notes by coderabbit.ai -->
pull Bot
pushed a commit
to ishandutta2007/deepmd-kit
that referenced
this pull request
Aug 29, 2026
## Summary Backport `0004-register-lammps-kokkos-plugin-styles.patch` from `conda-forge/deepmd-kit-feedstock@d02138263b0b30629fe28c68c8bcecc2b8644513`. Runtime LAMMPS plugins do not consume the `PairStyle` declarations used by the built-in package machinery, so explicitly register: - `deepmd/kk` - `deepmd/kk/device` - `deepmd/kk/host` - `dpa4spin/kk` - `dpa4spin/kk/device` - `dpa4spin/kk/host` The newly registered Kokkos plugin styles are attributed to **Tiancheng Li** via `plugin.author`. ## Validation - Single-file change derived from the feedstock patch, with only the requested author attribution adjusted. - Existing non-Kokkos plugin author fields are unchanged. - Split from deepmodeling#5985 so plugin registration can be reviewed independently. - Full build/runtime validation is left to upstream CI. Agent: ChatGPT Model: GPT-5.6 Sol <!-- This is an auto-generated comment: release notes by coderabbit.ai --> ## Summary by CodeRabbit - **New Features** - Added Kokkos-enabled support for DeepMD and DPA-4Spin pair styles. - Added host and device runtime variants for improved compatibility across supported execution environments. - Registered additional pair-style aliases so these implementations can be selected through standard runtime configuration. <!-- end of auto-generated comment: release notes by coderabbit.ai --> ## Dependencies and follow-up validation Merge order: corrected deepmodeling#5987, then deepmodeling#5989, then this PR. The Kokkos registrations in this PR depend on the compatibility boundary from deepmodeling#5987 and the shared-runtime linkage from deepmodeling#5989. Validated the combined changes with `DEEPMD_LAMMPS_KOKKOS=ON`, `PKG_PLUGIN=ON`, and `PKG_KOKKOS=ON` against `stable_22Jul2025_update5`, `patch_10Sep2025`, and `patch_20Aug2026`. In every build, `plugin load` succeeded and `plugin list` reported all six aliases: `deepmd/kk`, `deepmd/kk/device`, `deepmd/kk/host`, `dpa4spin/kk`, `dpa4spin/kk/device`, and `dpa4spin/kk/host`. Coding agent: Codex Codex version: codex-cli 0.149.0 Model: gpt-5.6-sol Reasoning effort: xhigh Co-authored-by: OutisLi <137472077+OutisLi@users.noreply.github.com>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
Superseded by the split PRs:
0001)0002)0004)0005)0003-kokkos-build-cuda-fatbins.patchremains excluded because it targets the separate LAMMPS source tree rather than DeePMD-kit.Agent: ChatGPT
Model: GPT-5.6 Sol