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(fix)fix ppdl init from noise and atom filtering. - #370

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mdc/fix-ppdl-init-from-noise
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(fix)fix ppdl init from noise and atom filtering.#370
marcuscollins wants to merge 6 commits into
mainfrom
mdc/fix-ppdl-init-from-noise

(chore)Fixes to pyproject.toml; ruff and ty checks

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