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Add ability to specify logfile= for run_with_vertical_hseq #271

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Merged
astrofrog merged 1 commit into from
Aug 4, 2026
Merged

Add ability to specify logfile= for run_with_vertical_hseq #271

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19 changes: 13 additions & 6 deletions hyperion/model/helpers.py
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Original file line number Diff line number Diff line change
Expand Up @@ -129,7 +129,7 @@ def hseq_profile(w, z, temperature, mstar, mu=2.279):
# mu = 2.279


def run_with_vertical_hseq(prefix, model, n_iter=10, mpi=False,
def run_with_vertical_hseq(prefix, model, n_iter=10, mpi=False, logfile=False,
n_processes=multiprocessing.cpu_count(),
overwrite=False):
"""
Expand Down Expand Up @@ -166,6 +166,9 @@ def run_with_vertical_hseq(prefix, model, n_iter=10, mpi=False,
The number of processes to use if ``mpi`` is ``True``
overwrite : bool, optional
Whether to overwrite previous files
logfile : bool, optional
If `True`, a logfile will be output for each iteration using `prefix`
as the base name
"""

from ..grid import CylindricalPolarGrid
Expand All @@ -186,12 +189,14 @@ def run_with_vertical_hseq(prefix, model, n_iter=10, mpi=False,
else:
n_disks = len(model.disks)

# Write out initial model
model.write(prefix + '_00000.rtin', overwrite=overwrite, merge_if_possible=False)
if not isinstance(logfile, bool):
raise TypeError('logfile should be True or False')

# Run the initial model
# Write out initial model and run
extra_kwargs = {'logfile': '{0:s}_{1:05d}.log'.format(prefix, 0)} if logfile else {}
model.write(prefix + '_00000.rtin', overwrite=overwrite, merge_if_possible=False)
mo = model.run(prefix + '_00000.rtout', overwrite=overwrite,
mpi=mpi, n_processes=n_processes)
mpi=mpi, n_processes=n_processes, **extra_kwargs)

previous = prefix + '_00000.rtout'

Expand Down Expand Up @@ -235,9 +240,11 @@ def run_with_vertical_hseq(prefix, model, n_iter=10, mpi=False,
# Override the density
m.grid['density'] = density


# Write and run
extra_kwargs = {'logfile': '{0:s}_{1:05d}.log'.format(prefix, iteration)} if logfile else {}
m.write('{0:s}_{1:05d}.rtin'.format(prefix, iteration), overwrite=overwrite)
m.run('{0:s}_{1:05d}.rtout'.format(prefix, iteration),
overwrite=overwrite, mpi=mpi, n_processes=n_processes)
overwrite=overwrite, mpi=mpi, n_processes=n_processes, **extra_kwargs)

previous = '{0:s}_{1:05d}.rtout'.format(prefix, iteration)
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