Repositories list

• panGraphViewer

  Public
  Show pangenome graphs in an easy way

  JavaScript

  •

  MIT License

  •55 forks•5959 stars•88 issues•00 pull requests•Updated Aug 7, 2025Aug 7, 2025

• miRDeep-P2_pipeline

  Public
  Perl

  •

  GNU General Public License v3.0

  •11 fork•88 stars•00 issues•00 pull requests•Updated Feb 24, 2024Feb 24, 2024

• ViralFusionSeq

  Public
  Accurately discover viral integration events and fusion transcripts

  Perl

  •

  GNU General Public License v3.0

  •22 forks•77 stars•22 issues•00 pull requests•Updated Oct 13, 2023Oct 13, 2023

• rG4-seeker

  Public
  Python

  •

  GNU General Public License v3.0

  •11 fork•33 stars•22 issues•00 pull requests•Updated Aug 31, 2023Aug 31, 2023

• LAFITE

  Public
  tool for long read transcriptome assembly

  nanoporelong-readtranscriptome-assembly+ 1

  nanoporelong-readtranscriptome-assemblydirect-rna-sequencing

  Jupyter Notebook

  •

  Apache License 2.0

  •22 forks•44 stars•11 issue•00 pull requests•Updated Aug 24, 2023Aug 24, 2023

• miRDeep2_pipeline

  Public
  Perl

  •

  GNU General Public License v3.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Jun 27, 2021Jun 27, 2021

• CAG_RNA_toxicity

  Public
  This repository is for depositing codes used in the manuscript, titled "CAG RNAs induce DNA damage and apoptosis by silencing NUDT16 expression in polyglutamine…

  Perl

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 6, 2021May 6, 2021

• OMTools

  Public
  A software package for optical mapping data processing, analysis and visualization

  Java

  •55 forks•99 stars•44 issues•00 pull requests•Updated Jun 19, 2020Jun 19, 2020

• OMBlast

  Public
  An alignment tool for optical mapping data

  Java

  •33 forks•1010 stars•22 issues•00 pull requests•Updated May 29, 2020May 29, 2020