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25 changes: 25 additions & 0 deletions packages/ATLAS/meta.yaml
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name: ATLAS
description:
ATLAS is a framework for multi-omic trajectory inference from paired single-cell RNA and ATAC sequencing data.
By integrating transcriptional and chromatin accessibility information within a unified representation, ATLAS enables pseudotime reconstruction and cell fate prediction that directly incorporate regulatory dynamics.
project_home: https://github.com/smilies-polito/atlas-smilies
documentation_home: https://atlas-smilies.readthedocs.io/
tutorials_home: https://atlas-smilies.readthedocs.io/
install:
pypi: atlas-smilies
tags:
- multimodal
- trajectory inference
- pseudotime
- scRNA-seq
- ATAC-seq
primary_category: Multimodal
language: Python
license: BSD-3-Clause
version: v1.0.0
contact:
- AlessiaLeclercq
- LorenzoMartiniTini
test_command: |
pip install ".[test]" && pytest
category: ecosystem
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