scvi
Here are 5 public repositories matching this topic...
Benchmarking AE, VAE, and scVI autoencoders to predict optimal latent dimension from cell-type complexity (K) in single-cell RNA-seq, using a trust-aware evidence framework across 5 curated datasets from PBMC to atlas-scale.
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Apr 12, 2026 - Python
Regularized scVI for complex multiome single-cell/nucleus datasets: ambient RNA correction, dispersion prior, and batch-free decoder act as structural inductive biases that make large-architecture VAEs well-behaved without per-dataset tuning.
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Apr 13, 2026 - Python
Lightweight, GPU-accelerated single-cell RNA-seq workflow for exploring the colorectal tumor microenvironment (CRC-TME) using Scanpy and scVI.
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Jan 2, 2026 - Python
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