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4 changes: 2 additions & 2 deletions .github/workflows/check_changelogs.yml
Original file line number Diff line number Diff line change
Expand Up @@ -17,12 +17,12 @@ jobs:
runs-on: ubuntu-latest

steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false

- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0

- name: Check zarr-python changelog entries
run: uv run --no-sync python ci/check_changelog_entries.py
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/codspeed.yml
Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ jobs:
github.event_name == 'workflow_dispatch' ||
(github.event_name == 'pull_request' && contains(github.event.pull_request.labels.*.name, 'benchmark'))
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0
persist-credentials: false
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/docs.yml
Original file line number Diff line number Diff line change
Expand Up @@ -19,10 +19,10 @@ jobs:
name: Check docs
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
- uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
- run: uv sync --group docs
# Fast source-level guards that need no built site, so they run before the (slower)
# build for a quick failure: every public export is in the API reference, and no
Expand Down
16 changes: 8 additions & 8 deletions .github/workflows/downstream.yml
Original file line number Diff line number Diff line change
Expand Up @@ -21,13 +21,13 @@ jobs:
runs-on: ubuntu-latest
steps:
- name: Check out zarr-python
uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0
persist-credentials: false

- name: Check out xarray
uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
repository: pydata/xarray
path: xarray
Expand All @@ -40,12 +40,12 @@ jobs:
# `meson-python: error: Unknown option "pixi-conda-environment"`, breaking
# the job before any test runs. Tests that need a backend we don't install
# are skipped via xarray's `requires_*` markers, not failed.
- uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: '3.13'

- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0

- name: Install xarray and test dependencies
working-directory: xarray
Expand Down Expand Up @@ -83,26 +83,26 @@ jobs:
runs-on: ubuntu-latest
steps:
- name: Check out zarr-python
uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0
persist-credentials: false

- name: Check out numcodecs
uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
repository: zarr-developers/numcodecs
fetch-depth: 0
path: numcodecs
submodules: recursive
persist-credentials: false

- uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: '3.13'

- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0

- name: Install numcodecs with test-zarr-main group
working-directory: numcodecs
Expand Down
6 changes: 3 additions & 3 deletions .github/workflows/gpu_test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -34,7 +34,7 @@ jobs:
python-version: ['3.12']

steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0 # grab all branches and tags
persist-credentials: false
Expand All @@ -57,12 +57,12 @@ jobs:
echo $LD_LIBRARY_PATH
nvcc -V
- name: Set up Python
uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: ${{ matrix.python-version }}
cache: 'pip'
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
- name: Install Hatch
uses: pypa/hatch@257e27e51a6a5616ed08a39a408a21c35c9931bc
with:
Expand Down
6 changes: 3 additions & 3 deletions .github/workflows/hypothesis.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@ jobs:
dependency-set: ["optional"]

steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- name: Set HYPOTHESIS_PROFILE based on trigger
Expand All @@ -52,12 +52,12 @@ jobs:
echo "HYPOTHESIS_PROFILE=ci" >> $GITHUB_ENV
fi
- name: Set up Python
uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: ${{ matrix.python-version }}
cache: 'pip'
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
- name: Install Hatch
uses: pypa/hatch@257e27e51a6a5616ed08a39a408a21c35c9931bc
with:
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/links.yml
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ jobs:
permissions:
issues: write # required for peter-evans/create-issue-from-file
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false

Expand Down
8 changes: 4 additions & 4 deletions .github/workflows/lint.yml
Original file line number Diff line number Diff line change
Expand Up @@ -19,15 +19,15 @@ jobs:
name: Lint
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- name: Set up Python
uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: "3.12"
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
with:
enable-cache: true
- uses: j178/prek-action@e98a699c41eb69ab013a45817a0406469a748f8d # v2.0.5
- uses: j178/prek-action@5337cb91e0fa35a7ff31b9ca345126d8bbbcdf16 # v2.0.6
4 changes: 2 additions & 2 deletions .github/workflows/nightly_wheels.yml
Original file line number Diff line number Diff line change
Expand Up @@ -22,13 +22,13 @@ jobs:
runs-on: ubuntu-latest

steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
submodules: true
fetch-depth: 0
persist-credentials: false

- uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
name: Install Python
with:
python-version: '3.14'
Expand Down
6 changes: 3 additions & 3 deletions .github/workflows/releases.yml
Original file line number Diff line number Diff line change
Expand Up @@ -26,13 +26,13 @@ jobs:
fail-fast: false

steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
submodules: true
fetch-depth: 0
persist-credentials: false

- uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
- uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
name: Install Python
with:
python-version: '3.12'
Expand Down Expand Up @@ -85,4 +85,4 @@ jobs:
with:
subject-path: dist/*
- name: Publish package to PyPI
uses: pypa/gh-action-pypi-publish@cef221092ed1bacb1cc03d23a2d87d1d172e277b # v1.14.0
uses: pypa/gh-action-pypi-publish@ba38be9e461d3875417946c167d0b5f3d385a247 # v1.14.1
24 changes: 12 additions & 12 deletions .github/workflows/test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -56,17 +56,17 @@ jobs:
runs-on: ${{ matrix.os }}

steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0 # grab all branches and tags
persist-credentials: false
- name: Set up Python
uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: ${{ matrix.python-version }}
cache: 'pip'
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
- name: Install Hatch
run: python -m pip install hatch==1.16.5
- name: Set Up Hatch Env
Expand Down Expand Up @@ -105,17 +105,17 @@ jobs:
- python-version: "3.12"
dependency-set: upstream
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0
persist-credentials: false
- name: Set up Python
uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: ${{ matrix.python-version }}
cache: 'pip'
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
- name: Install Hatch
run: python -m pip install hatch==1.16.5
- name: Set Up Hatch Env
Expand All @@ -140,17 +140,17 @@ jobs:
name: doctests
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0 # required for hatch version discovery, which is needed for numcodecs.zarr3
persist-credentials: false
- name: Set up Python
uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: '3.13'
cache: 'pip'
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
- name: Install Hatch
run: python -m pip install hatch==1.16.5
- name: Set Up Hatch Env
Expand All @@ -164,17 +164,17 @@ jobs:
name: Benchmark smoke test
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0
persist-credentials: false
- name: Set up Python
uses: actions/setup-python@ece7cb06caefa5fff74198d8649806c4678c61a1 # v6.3.0
uses: actions/setup-python@5fda3b95a4ea91299a34e894583c3862153e4b97 # v7.0.0
with:
python-version: '3.13'
cache: 'pip'
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
- name: Install Hatch
run: python -m pip install hatch==1.16.5
- name: Run Benchmarks
Expand Down
8 changes: 4 additions & 4 deletions .github/workflows/zarr-metadata-release.yml
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ jobs:
shell: bash
working-directory: packages/zarr-metadata
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
fetch-depth: 0 # hatch-vcs needs full history + tags
Expand Down Expand Up @@ -51,7 +51,7 @@ jobs:
path: dist

- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
with:
enable-cache: false

Expand Down Expand Up @@ -87,7 +87,7 @@ jobs:
subject-path: dist/*

- name: Publish package to PyPI
uses: pypa/gh-action-pypi-publish@cef221092ed1bacb1cc03d23a2d87d1d172e277b # v1.14.0
uses: pypa/gh-action-pypi-publish@ba38be9e461d3875417946c167d0b5f3d385a247 # v1.14.1

upload_testpypi:
name: Upload to TestPyPI
Expand All @@ -112,6 +112,6 @@ jobs:
subject-path: dist/*

- name: Publish package to TestPyPI
uses: pypa/gh-action-pypi-publish@cef221092ed1bacb1cc03d23a2d87d1d172e277b # v1.14.0
uses: pypa/gh-action-pypi-publish@ba38be9e461d3875417946c167d0b5f3d385a247 # v1.14.1
with:
repository-url: https://test.pypi.org/legacy/
16 changes: 8 additions & 8 deletions .github/workflows/zarr-metadata.yml
Original file line number Diff line number Diff line change
Expand Up @@ -35,11 +35,11 @@ jobs:
matrix:
python-version: ['3.11', '3.12', '3.13', '3.14']
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
with:
enable-cache: true
- name: Install just
Expand All @@ -59,11 +59,11 @@ jobs:
shell: bash
working-directory: packages/zarr-metadata
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
- name: Install just
uses: extractions/setup-just@53165ef7e734c5c07cb06b3c8e7b647c5aa16db3 # v4
- name: Run ruff
Expand All @@ -77,11 +77,11 @@ jobs:
shell: bash
working-directory: packages/zarr-metadata
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
with:
enable-cache: true
- name: Install just
Expand All @@ -98,11 +98,11 @@ jobs:
shell: bash
working-directory: packages/zarr-metadata
steps:
- uses: actions/checkout@9c091bb21b7c1c1d1991bb908d89e4e9dddfe3e0 # v7.0.0
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- name: Install uv
uses: astral-sh/setup-uv@11f9893b081a58869d3b5fccaea48c9e9e46f990 # v8.3.2
uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
with:
enable-cache: true
- name: Install just
Expand Down
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